RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 TMEM249Q2WGJ8 235 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 TEX35Q5T0J7 233 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 TEDDM1Q5T9Z0 273 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 DEPDC1Q5TB30 811 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 PRAMEF9Q5VWM5 478 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 KHDRBS2Q5VWX1 349 aaKnown RBP10.41□□□□□ -0.74
RNF4-216ENST00000511859 LIPNQ5VXI9 398 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 DNAJC14Q6Y2X3 702 aaPredicted RBP10.41□□□□□ -0.74
RNF4-216ENST00000511859 PLCZ1Q86YW0 608 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 OR7G1Q8NGA0 311 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 RGMAQ96B86 450 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 NODALQ96S42 347 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 CENPKQ9BS16 269 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 ERP44Q9BS26 406 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 OR10A4Q9H209 315 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 GALNT9Q9HCQ5 603 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 PLSCR4Q9NRQ2 329 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 CTNNAL1Q9UBT7 734 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 CFL2Q9Y281 166 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 PCNX3Q9H6A9 2034 aa10.41□□□□□ -0.74
RNF4-216ENST00000511859 TAPBPO15533 448 aa10.4□□□□□ -0.74
RNF4-216ENST00000511859 ZIC3O60481 467 aa10.4□□□□□ -0.74
RNF4-216ENST00000511859 STK16O75716 305 aa10.4□□□□□ -0.74
RNF4-216ENST00000511859 IGHV4-39P01824 125 aa10.4□□□□□ -0.74
RNF4-216ENST00000511859 CD22P20273 847 aa10.4□□□□□ -0.74
RNF4-216ENST00000511859 VLDLRP98155 873 aa10.4□□□□□ -0.74
RNF4-216ENST00000511859 GUCY2DQ02846 1103 aa10.4□□□□□ -0.74
RNF4-216ENST00000511859 E2F2Q14209 437 aa10.4□□□□□ -0.74
RNF4-216ENST00000511859 TGFBIQ15582 683 aa10.4□□□□□ -0.74
RNF4-216ENST00000511859 EXOC3L2Q2M3D2 409 aa10.4□□□□□ -0.74
RNF4-216ENST00000511859 CDKL4Q5MAI5 379 aa10.4□□□□□ -0.74
RNF4-216ENST00000511859 SPANXN3Q5MJ09 141 aa10.4□□□□□ -0.74
RNF4-216ENST00000511859 RNASEH2BQ5TBB1 312 aaKnown RBP10.4□□□□□ -0.74
RNF4-216ENST00000511859 STAC2Q6ZMT1 411 aa10.4□□□□□ -0.74
RNF4-216ENST00000511859 FAM214BQ7L5A3 538 aa10.4□□□□□ -0.74
RNF4-216ENST00000511859 GALNT12Q8IXK2 581 aa10.4□□□□□ -0.74
RNF4-216ENST00000511859 PPIL6Q8IXY8 311 aa10.4□□□□□ -0.74
RNF4-216ENST00000511859 LILRB1Q8NHL6 650 aaPredicted RBP10.4□□□□□ -0.74
RNF4-216ENST00000511859 FIG4Q92562 907 aa10.4□□□□□ -0.74
RNF4-216ENST00000511859 HS6ST2Q96MM7 605 aa10.4□□□□□ -0.74
RNF4-216ENST00000511859 NAT9Q9BTE0 207 aa10.4□□□□□ -0.74
RNF4-216ENST00000511859 GRIP2Q9C0E4 1043 aa10.4□□□□□ -0.74
RNF4-216ENST00000511859 NXF5Q9H1B4 397 aaKnown RBP10.4□□□□□ -0.74
RNF4-216ENST00000511859 WDR41Q9HAD4 459 aa10.4□□□□□ -0.74
RNF4-216ENST00000511859 WHRNQ9P202 907 aa10.4□□□□□ -0.74
RNF4-216ENST00000511859 PLCE1Q9P212 2302 aa10.4□□□□□ -0.74
RNF4-216ENST00000511859 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.4□□□□□ -0.74
RNF4-216ENST00000511859 DMGDHQ9UI17 866 aaKnown RBP10.4□□□□□ -0.74
RNF4-216ENST00000511859 DTX4Q9Y2E6 619 aa10.4□□□□□ -0.74
RNF4-216ENST00000511859 UTP11Q9Y3A2 253 aaKnown RBP10.4□□□□□ -0.74
RNF4-216ENST00000511859 ZNF175Q9Y473 711 aa10.4□□□□□ -0.74
RNF4-216ENST00000511859 MAGED1Q9Y5V3 778 aaPredicted RBP10.4□□□□□ -0.74
RNF4-216ENST00000511859 V9GYY5 206 aaPredicted RBP10.4□□□□□ -0.74
RNF4-216ENST00000511859 TGP01266 2768 aa10.4□□□□□ -0.75
RNF4-216ENST00000511859 NCF1BA6NI72 391 aaPredicted RBP10.39□□□□□ -0.75
RNF4-216ENST00000511859 WASHC1A8K0Z3 465 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 NCF1CA8MVU1 366 aaPredicted RBP10.39□□□□□ -0.75
RNF4-216ENST00000511859 SAP18O00422 153 aaKnown RBP10.39□□□□□ -0.75
RNF4-216ENST00000511859 ACOX3O15254 700 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 SH3BGRLO75368 114 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 BANF1O75531 89 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 PRKRAO75569 313 aaKnown RBP10.39□□□□□ -0.75
RNF4-216ENST00000511859 SEC31AO94979 1220 aaKnown RBP10.39□□□□□ -0.75
RNF4-216ENST00000511859 PGRP06401 933 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 FESP07332 822 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 NCF1P14598 390 aaPredicted RBP10.39□□□□□ -0.75
RNF4-216ENST00000511859 SRD5A1P18405 259 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 RAP1GDS1P52306 607 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 CASP9P55211 416 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 HNRNPH2P55795 449 aaKnown RBP10.39□□□□□ -0.75
RNF4-216ENST00000511859 DSCR9P59020 149 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 IRF8Q02556 426 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 LOXL1Q08397 574 aaPredicted RBP10.39□□□□□ -0.75
RNF4-216ENST00000511859 CHIT1Q13231 466 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 GUSBP1Q15486 140 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 TSNQ15631 228 aaKnown RBP10.39□□□□□ -0.75
RNF4-216ENST00000511859 PDK4Q16654 411 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 NRF1Q16656 503 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 CYB5R2Q6BCY4 276 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 MED27Q6P2C8 311 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 WFDC8Q8IUA0 241 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 LAS2Q8IYD9 372 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 GBP7Q8N8V2 638 aaPredicted RBP10.39□□□□□ -0.75
RNF4-216ENST00000511859 NAT8LQ8N9F0 302 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 SNX31Q8N9S9 440 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 TMCO6Q96DC7 493 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 C11orf24Q96F05 449 aaPredicted RBP10.39□□□□□ -0.75
RNF4-216ENST00000511859 CERS2Q96G23 380 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 PLA2G12AQ9BZM1 189 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 RAB17Q9H0T7 212 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 OR51B5Q9H339 312 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 PPANQ9NQ55 473 aaKnown RBP10.39□□□□□ -0.75
RNF4-216ENST00000511859 LYARQ9NX58 379 aaKnown RBP10.39□□□□□ -0.75
RNF4-216ENST00000511859 DKKL1Q9UK85 242 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 GPR52Q9Y2T5 361 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 RNF115Q9Y4L5 304 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 ASB4Q9Y574 426 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 A0A1W2PP18 115 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 PRAMEF25A6NGN4 478 aa10.39□□□□□ -0.75
RNF4-216ENST00000511859 GLOD5A6NK44 160 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms