RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 NUDCD1Q96RS6 583 aa4.93□□□□□ -1.62
GYPB-212ENST00000511198 PKP2Q99959 881 aa4.93□□□□□ -1.62
GYPB-212ENST00000511198 FAM167BQ9BTA0 163 aa4.93□□□□□ -1.62
GYPB-212ENST00000511198 TM6SF2Q9BZW4 377 aa4.93□□□□□ -1.62
GYPB-212ENST00000511198 THAP2Q9H0W7 228 aa4.93□□□□□ -1.62
GYPB-212ENST00000511198 VCX3BQ9H321 246 aa4.93□□□□□ -1.62
GYPB-212ENST00000511198 CATSPERBQ9H7T0 1116 aa4.93□□□□□ -1.62
GYPB-212ENST00000511198 VCX3AQ9NNX9 186 aa4.93□□□□□ -1.62
GYPB-212ENST00000511198 SEPT11Q9NVA2 429 aaKnown RBP4.93□□□□□ -1.62
GYPB-212ENST00000511198 TMEM160Q9NX00 188 aa4.93□□□□□ -1.62
GYPB-212ENST00000511198 NINJ2Q9NZG7 142 aa4.93□□□□□ -1.62
GYPB-212ENST00000511198 TBC1D7Q9P0N9 293 aa4.93□□□□□ -1.62
GYPB-212ENST00000511198 FETUBQ9UGM5 382 aa4.93□□□□□ -1.62
GYPB-212ENST00000511198 ASIC3Q9UHC3 531 aa4.93□□□□□ -1.62
GYPB-212ENST00000511198 NOTCH3Q9UM47 2321 aa4.93□□□□□ -1.62
GYPB-212ENST00000511198 ICKQ9UPZ9 632 aa4.93□□□□□ -1.62
GYPB-212ENST00000511198 CHKBQ9Y259 395 aa4.93□□□□□ -1.62
GYPB-212ENST00000511198 DNAJC16Q9Y2G8 782 aa4.93□□□□□ -1.62
GYPB-212ENST00000511198 PADI2Q9Y2J8 665 aa4.93□□□□□ -1.62
GYPB-212ENST00000511198 PCYT1BQ9Y5K3 369 aaPredicted RBP4.93□□□□□ -1.62
GYPB-212ENST00000511198 PHF3Q92576 2039 aaKnown RBP4.92□□□□□ -1.62
GYPB-212ENST00000511198 SCN2AQ99250 2005 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 ANKRD12Q6UB98 2062 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 SIGLEC16A6NMB1 481 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 SPOPO43791 374 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 CCDC22O60826 627 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 RECQL5O94762 991 aaPredicted RBP4.92□□□□□ -1.62
GYPB-212ENST00000511198 GCNT3O95395 438 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 ACSL3O95573 720 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 WDPCPO95876 746 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 SETSIPP0DME0 302 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 MYBL1P10243 752 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 AMD1P17707 334 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 SRD5A1P18405 259 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 ABCD1P33897 745 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 HOXD13P35453 343 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 SLC1A1P43005 524 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 SERPINH1P50454 418 aaKnown RBP4.92□□□□□ -1.62
GYPB-212ENST00000511198 DAOAP59103 153 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 RPL26P61254 145 aaKnown RBP4.92□□□□□ -1.62
GYPB-212ENST00000511198 SNRPFP62306 86 aaKnown RBP4.92□□□□□ -1.62
GYPB-212ENST00000511198 UBE2IP63279 158 aaKnown RBP4.92□□□□□ -1.62
GYPB-212ENST00000511198 ADIGQ0VDE8 80 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 AP1B1Q10567 949 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 ALKBH1Q13686 389 aaKnown RBP4.92□□□□□ -1.62
GYPB-212ENST00000511198 KRT72Q14CN4 511 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 RPS6KA2Q15349 733 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 ZNF699Q32M78 642 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 ZNF789Q5FWF6 425 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 IRAK1BP1Q5VVH5 260 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 OR52E8Q6IFG1 317 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 PPP1R2P3Q6NXS1 205 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 TMEM154Q6P9G4 183 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 GJB7Q6PEY0 223 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 KLHL17Q6TDP4 642 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 GDPD4Q6W3E5 623 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 LRRC74BQ6ZQY2 392 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 STRADAQ7RTN6 431 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 C12orf56Q8IXR9 622 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 GHDCQ8N2G8 530 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 RYBPQ8N488 228 aaPredicted RBP4.92□□□□□ -1.62
GYPB-212ENST00000511198 LMO3Q8TAP4 145 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 LINC01560Q8TB33 94 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 GDAP1Q8TB36 358 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 FAM57AQ8TBR7 257 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 STT3BQ8TCJ2 826 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 DQX1Q8TE96 717 aaKnown RBP4.92□□□□□ -1.62
GYPB-212ENST00000511198 LZICQ8WZA0 190 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 KRT35Q92764 455 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 KCNJ9Q92806 393 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 FAM81BQ96LP2 452 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 SMC6Q96SB8 1091 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 ZNF700Q9H0M5 742 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 SYNCQ9H7C4 482 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 DMAC2Q9NW81 257 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 NMRK1Q9NWW6 199 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 EPHA6Q9UF33 1036 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 SLC24A2Q9UI40 661 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 ANAPC5Q9UJX4 755 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 SLC17A4Q9Y2C5 497 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.92□□□□□ -1.62
GYPB-212ENST00000511198 RAP2CQ9Y3L5 183 aa4.92□□□□□ -1.62
GYPB-212ENST00000511198 FAM90A20PA6NIJ5 464 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 C9J4A7 227 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 MS4A18H0YCH9 400 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 TM9SF1O15321 606 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 PSTPIP1O43586 416 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 TMCC1O94876 653 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 TGDSO95455 350 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 FCGR2AP12318 317 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 IVDP26440 423 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 SERPINA4P29622 427 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 FOXN2P32314 431 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 CETN2P41208 172 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 HTR3AP46098 478 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 MARCKSL1P49006 195 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 CASP4P49662 377 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 PDLIM4P50479 330 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 ARF5P84085 180 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 SLC34A1Q06495 639 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms