RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 SASH3O75995 380 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 LDLRP01130 860 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 P04436 131 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 LAMP1P11279 417 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 PRPS1L1P21108 318 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 NTSP30990 170 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 MC3RP41968 323 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 CASP3P42574 277 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 DNASE1L1P49184 302 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 NRG3P56975 720 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 PPIAP62937 165 aaKnown RBP10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 PTGR1Q14914 329 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 RPS6KA2Q15349 733 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 C4orf17Q53FE4 359 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 EXOSC6Q5RKV6 272 aaKnown RBP10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 FNDC7Q5VTL7 733 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 DESI1Q6ICB0 168 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 TMEM107Q6UX40 140 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 GK5Q6ZS86 529 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 FAM47EQ6ZV65 393 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 NUP54Q7Z3B4 507 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 R3HCC1LQ7Z5L2 792 aaKnown RBP10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 CAMKMTQ7Z624 323 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 TMEM251Q8N6I4 163 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 OR7A2PQ8NGA2 310 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 PSMA8Q8TAA3 256 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 MGARPQ8TDB4 240 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 RNF138Q8WVD3 245 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 OMA1Q96E52 524 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 SLC35A4Q96G79 324 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 C1orf50Q9BV19 199 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 ANGPTL4Q9BY76 406 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 MANSC1Q9H8J5 431 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 FOLH1BQ9HBA9 442 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 TUBA8Q9NY65 449 aaPredicted RBP10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 TAS2R9Q9NYW1 312 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 SH3BP4Q9P0V3 963 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 SLC5A6Q9Y289 635 aa10.79□□□□□ -0.68
HMGXB3-203ENST00000510472 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 A0A1B0GVC2 190 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 SDHDO14521 159 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 ZNF195O14628 629 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 TP53I11O14683 189 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 ANKRD28O15084 1053 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 LRRTM2O43300 516 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 TSPAN2O60636 221 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 SLC19A2O60779 497 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 UGT2B11O75310 529 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 ERN1O75460 977 aaKnown RBP10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 IGHG3P01860 377 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 RFPL3SP0C7P2 107 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 RPL3P39023 403 aaKnown RBP10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 PTGDSP41222 190 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 TMED10P49755 219 aaKnown RBP10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 CDK9P50750 372 aaKnown RBP10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 DIO3P55073 304 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 CLDN8P56748 225 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 CORO7P57737 925 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 PSPHP78330 225 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 MAD2L1Q13257 205 aaPredicted RBP10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 NNATQ16517 81 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 TBCELQ5QJ74 424 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 PRAMEF20Q5VT98 475 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 ATG16L1Q676U5 607 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 BICRALQ6AI39 1079 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 OGFOD2Q6N063 350 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 SPPL2CQ8IUH8 684 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 TRIM42Q8IWZ5 723 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 PRR22Q8IZ63 422 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 SLC34A3Q8N130 599 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 GHDCQ8N2G8 530 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 KRTCAP2Q8N6L1 136 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 FAM13CQ8NE31 585 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 OR5M3Q8NGP4 307 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 ZNF75CPQ92670 426 aaPredicted RBP10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 GIMAP5Q96F15 307 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 ZBED6CLQ96FA7 236 aaPredicted RBP10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 LMF2Q9BU23 707 aaKnown RBP10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 NUF2Q9BZD4 464 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 ZFP64Q9NPA5 681 aa10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 SIRT3Q9NTG7 399 aaPredicted RBP10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 ARGLU1Q9NWB6 273 aaPredicted RBP10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 NOP53Q9NZM5 478 aaKnown RBP10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 EIF3LQ9Y262 564 aaKnown RBP10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.78□□□□□ -0.68
HMGXB3-203ENST00000510472 OR6C70A6NIJ9 312 aa10.77□□□□□ -0.69
HMGXB3-203ENST00000510472 ADAM10O14672 748 aa10.77□□□□□ -0.69
HMGXB3-203ENST00000510472 TFECO14948 347 aaPredicted RBP10.77□□□□□ -0.69
HMGXB3-203ENST00000510472 HDAC3O15379 428 aa10.77□□□□□ -0.69
HMGXB3-203ENST00000510472 COQ9O75208 318 aa10.77□□□□□ -0.69
HMGXB3-203ENST00000510472 AGFG2O95081 481 aa10.77□□□□□ -0.69
HMGXB3-203ENST00000510472 SNX4O95219 450 aa10.77□□□□□ -0.69
HMGXB3-203ENST00000510472 LBPP18428 481 aa10.77□□□□□ -0.69
HMGXB3-203ENST00000510472 CA7P43166 264 aa10.77□□□□□ -0.69
HMGXB3-203ENST00000510472 MANFP55145 182 aaKnown RBP10.77□□□□□ -0.69
HMGXB3-203ENST00000510472 WNT3P56703 355 aa10.77□□□□□ -0.69
HMGXB3-203ENST00000510472 HSF1Q00613 529 aa10.77□□□□□ -0.69
HMGXB3-203ENST00000510472 GAB1Q13480 694 aa10.77□□□□□ -0.69
HMGXB3-203ENST00000510472 CYP27C1Q4G0S4 372 aa10.77□□□□□ -0.69
HMGXB3-203ENST00000510472 SLC22A16Q86VW1 577 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms