RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 SELPLGQ14242 412 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 TRIP10Q15642 601 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 DUSP5Q16690 384 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 GPAT3Q53EU6 434 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 TAF3Q5VWG9 929 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 CARD17Q5XLA6 110 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 ASPHD2Q6ICH7 369 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 DHRS11Q6UWP2 260 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 SERINC5Q86VE9 423 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 TDHQ8IZJ6 230 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 LRRC75A-AS1Q8N1F1 130 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 CCDC185Q8N715 623 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 TMEM99Q8N816 258 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 SPERTQ8NA61 448 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 SMYD1Q8NB12 490 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 COLGALT1Q8NBJ5 622 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 TRPV3Q8NET8 790 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 OR9K2Q8NGE7 335 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 SAP25Q8TEE9 199 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 OSTF1Q92882 214 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 EMG1Q92979 244 aaKnown RBP3.31□□□□□ -1.88
CAST-229ENST00000510098 RAB39BQ96DA2 213 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 OMA1Q96E52 524 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 C19orf60Q96EN9 201 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 OPRPNQ99935 248 aaPredicted RBP3.31□□□□□ -1.88
CAST-229ENST00000510098 WRAP53Q9BUR4 548 aaKnown RBP3.31□□□□□ -1.88
CAST-229ENST00000510098 HOXD1Q9GZZ0 328 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 GFRA4Q9GZZ7 299 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 HAUS4Q9H6D7 363 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 MEAF6Q9HAF1 191 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 ZDHHC18Q9NUE0 388 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 SPATA7Q9P0W8 599 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 PSORS1C1Q9UIG5 152 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 LNPEPQ9UIQ6 1025 aa3.31□□□□□ -1.88
CAST-229ENST00000510098 NIP7Q9Y221 180 aaKnown RBP eCLIP3.31□□□□□ -1.88
CAST-229ENST00000510098 CUX2O14529 1486 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 LOC100653049A0A140TA62 436 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 MEI4A8MW99 385 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 WASH3PC4AMC7 463 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 PPIAL4DF5H284 164 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 GOLGA8SH3BPF8 625 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 ZNF264O43296 627 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 BCAS1O75363 584 aaPredicted RBP3.3□□□□□ -1.88
CAST-229ENST00000510098 KRT34O76011 436 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 OTCP00480 354 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 KRT14P02533 472 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 MT-ND2P03891 347 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 CAPN1P07384 714 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 HIST1H2AGP0C0S8 130 aaPredicted RBP3.3□□□□□ -1.88
CAST-229ENST00000510098 DBTP11182 482 aaKnown RBP3.3□□□□□ -1.88
CAST-229ENST00000510098 ANPEPP15144 967 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 CTNNA2P26232 953 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 BMI1P35226 326 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 DEKP35659 375 aaKnown RBP3.3□□□□□ -1.88
CAST-229ENST00000510098 TRIM23P36406 574 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 GRIA1P42261 906 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 SYKP43405 635 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 HADHBP55084 474 aaKnown RBP3.3□□□□□ -1.88
CAST-229ENST00000510098 EIF3EP60228 445 aaKnown RBP3.3□□□□□ -1.88
CAST-229ENST00000510098 IRX1P78414 480 aaPredicted RBP3.3□□□□□ -1.88
CAST-229ENST00000510098 BTG3Q14201 252 aaPredicted RBP3.3□□□□□ -1.88
CAST-229ENST00000510098 MTF1Q14872 753 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 KRT71Q3SY84 523 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 MPPE1Q53F39 396 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 SPANXN2Q5MJ10 180 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 ZNF772Q68DY9 489 aaPredicted RBP3.3□□□□□ -1.88
CAST-229ENST00000510098 SYT10Q6XYQ8 523 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 KIF6Q6ZMV9 814 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 Q6ZRP5 223 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 C16orf62Q7Z3J2 963 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 TRMT11Q7Z4G4 463 aaKnown RBP3.3□□□□□ -1.88
CAST-229ENST00000510098 COX8CQ7Z4L0 72 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 CDR2LQ86X02 465 aaPredicted RBP3.3□□□□□ -1.88
CAST-229ENST00000510098 KRTAP7-1Q8IUC3 87 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.3□□□□□ -1.88
CAST-229ENST00000510098 CBWD2Q8IUF1 395 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 ZNF485Q8NCK3 441 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 NUP37Q8NFH4 326 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 SLCO2A1Q92959 643 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 HIST1H2ACQ93077 130 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 MCHR2Q969V1 340 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 IFT74Q96LB3 600 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 GAL3ST1Q99999 423 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 SIKE1Q9BRV8 207 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 TRIM51Q9BSJ1 452 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 TMEM43Q9BTV4 400 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 NUP58Q9BVL2 599 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 IQCGQ9H095 443 aaKnown RBP3.3□□□□□ -1.88
CAST-229ENST00000510098 MTHFD2LQ9H903 347 aaPredicted RBP3.3□□□□□ -1.88
CAST-229ENST00000510098 MED20Q9H944 212 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 CALHM2Q9HA72 323 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 C3orf14Q9HBI5 128 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 B3GAT2Q9NPZ5 323 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 DDX28Q9NUL7 540 aaKnown RBP3.3□□□□□ -1.88
CAST-229ENST00000510098 TEX10Q9NXF1 929 aaPredicted RBP3.3□□□□□ -1.88
CAST-229ENST00000510098 B9D1Q9UPM9 204 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 SATB2Q9UPW6 733 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 ATG4BQ9Y4P1 393 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 COMMD3-BMI1R4GMX3 469 aa3.3□□□□□ -1.88
CAST-229ENST00000510098 ARHGEF35A5YM69 484 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms