RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 CLDN4O14493 209 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 PDCD5O14737 125 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 LYRM1O43325 122 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 LCMT2O60294 686 aaKnown RBP2.13□□□□□ -2.07
CAST-226ENST00000509529 DLX3O60479 287 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 TSPAN3O60637 253 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 PRKRAO75569 313 aaKnown RBP2.13□□□□□ -2.07
CAST-226ENST00000509529 EIF3GO75821 320 aaKnown RBP eCLIP2.13□□□□□ -2.07
CAST-226ENST00000509529 CSPG5O95196 566 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 LATS1O95835 1130 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 F2P00734 622 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 F10P00742 488 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 ICAM1P05362 532 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 POLBP06746 335 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 GP1BAP07359 652 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 HIST1H2AGP0C0S8 130 aaPredicted RBP2.13□□□□□ -2.07
CAST-226ENST00000509529 SLC25A4P12235 298 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 CYP4B1P13584 511 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 GABRA1P14867 456 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 ETS1P14921 441 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 HLA-GP17693 338 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 ALOX12P18054 663 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 NPR2P20594 1047 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 HIST1H2ADP20671 130 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 CAPN3P20807 821 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 LPOP22079 712 aaPredicted RBP2.13□□□□□ -2.07
CAST-226ENST00000509529 CCR7P32248 378 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 SDC2P34741 201 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 ARR3P36575 388 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 ARL1P40616 181 aaPredicted RBP2.13□□□□□ -2.07
CAST-226ENST00000509529 ATP5OP48047 213 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 EVX1P49640 407 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 RBP2P50120 134 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 TNFSF10P50591 281 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 ADPRHP54922 357 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 EFNB1P98172 346 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 SORDQ00796 357 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 PLIN5Q00G26 463 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 ACVR1Q04771 509 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 LIPEQ05469 1076 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 CHRNB3Q05901 458 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 IL10RBQ08334 325 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 TMEM115Q12893 351 aaPredicted RBP2.13□□□□□ -2.07
CAST-226ENST00000509529 FOXL1Q12952 345 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 PRDX4Q13162 271 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 MAD2L1Q13257 205 aaPredicted RBP2.13□□□□□ -2.07
CAST-226ENST00000509529 ZNF177Q13360 481 aaPredicted RBP2.13□□□□□ -2.07
CAST-226ENST00000509529 SCARB2Q14108 478 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 VEZF1Q14119 521 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 CYP51A1Q16850 503 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 UNC50Q53HI1 259 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 RAB6CQ53S08 254 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 ZRANB3Q5FWF4 1079 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 AVPI1Q5T686 147 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 HEATR6Q6AI08 1181 aaKnown RBP2.13□□□□□ -2.07
CAST-226ENST00000509529 HIST2H2AA3Q6FI13 130 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 KIAA1161Q6NSJ0 714 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 C11orf88Q6PI97 169 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 PLET1Q6UQ28 207 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 DRAM2Q6UX65 266 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 IL34Q6ZMJ4 242 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 ZNF730Q6ZMV8 503 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 ZNF813Q6ZN06 617 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 QSOX2Q6ZRP7 698 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 BTN2A1Q7KYR7 527 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 MAMDC2Q7Z304 686 aaPredicted RBP2.13□□□□□ -2.07
CAST-226ENST00000509529 SERPINA11Q86U17 422 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 PIGZQ86VD9 579 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 TPRA1Q86W33 373 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 SVBPQ8N300 66 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 GPR137CQ8N3F9 429 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 C12orf45Q8N5I9 185 aaPredicted RBP2.13□□□□□ -2.07
CAST-226ENST00000509529 NANOGP1Q8N7R0 232 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 ZNF557Q8N988 423 aaPredicted RBP2.13□□□□□ -2.07
CAST-226ENST00000509529 ZNF485Q8NCK3 441 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 C11orf65Q8NCR3 313 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 TMEM104Q8NE00 496 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 FAM46DQ8NEK8 389 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 RNASE11Q8TAA1 199 aaKnown RBP2.13□□□□□ -2.07
CAST-226ENST00000509529 ZNF675Q8TD23 568 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 KCNJ9Q92806 393 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 KAT2AQ92830 837 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 PYCR2Q96C36 320 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 MTFMTQ96DP5 389 aaKnown RBP2.13□□□□□ -2.07
CAST-226ENST00000509529 TCEAL4Q96EI5 215 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 TRMT61AQ96FX7 289 aaKnown RBP2.13□□□□□ -2.07
CAST-226ENST00000509529 ZFYVE19Q96K21 471 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 HIST1H2AHQ96KK5 128 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 ZNF599Q96NL3 588 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 YPEL4Q96NS1 127 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 FERD3LQ96RJ6 166 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 SEPT5Q99719 369 aaPredicted RBP2.13□□□□□ -2.07
CAST-226ENST00000509529 HIST1H2AJQ99878 128 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 MAPKAP1Q9BPZ7 522 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 TREX2Q9BQ50 279 aaPredicted RBP2.13□□□□□ -2.07
CAST-226ENST00000509529 ZNF426Q9BUY5 554 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 RAB6CQ9H0N0 254 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 OSBPL2Q9H1P3 480 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 SMOC1Q9H4F8 434 aa2.13□□□□□ -2.07
CAST-226ENST00000509529 NMNAT1Q9HAN9 279 aaPredicted RBP2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms