RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 APEX1P27695 318 aaKnown RBP3.44□□□□□ -1.86
RNF4-211ENST00000509206 RBL1P28749 1068 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 TTKP33981 857 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 RPL22P35268 128 aaKnown RBP3.44□□□□□ -1.86
RNF4-211ENST00000509206 CHN2P52757 468 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 RAB38P57729 211 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 FBXW4P57775 412 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 RPS3AP61247 264 aaKnown RBP3.44□□□□□ -1.86
RNF4-211ENST00000509206 STXBP1P61764 594 aaKnown RBP3.44□□□□□ -1.86
RNF4-211ENST00000509206 PHC1P78364 1004 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 IRF9Q00978 393 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 BSPH1Q075Z2 132 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 GBX1Q14549 363 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 RPS6KA2Q15349 733 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 RPS6KA1Q15418 735 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 KLHL38Q2WGJ6 581 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 TMEM177Q53S58 311 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 TOR1AIP1Q5JTV8 583 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 ERICH6BQ5W0A0 696 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 BICRALQ6AI39 1079 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 TIGD3Q6B0B8 471 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 FAHD2BQ6P2I3 314 aaPredicted RBP3.44□□□□□ -1.86
RNF4-211ENST00000509206 DARS2Q6PI48 645 aaKnown RBP3.44□□□□□ -1.86
RNF4-211ENST00000509206 STAC2Q6ZMT1 411 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 ADGRE4PQ86SQ3 457 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 SDCCAG8Q86SQ7 713 aaPredicted RBP3.44□□□□□ -1.86
RNF4-211ENST00000509206 DTX2Q86UW9 622 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 GLCCI1Q86VQ1 547 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 VSIG1Q86XK7 387 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 C1QL4Q86Z23 238 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 BPIFB2Q8N4F0 458 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 FAM47BQ8NA70 645 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 TMEM52Q8NDY8 209 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 TRPV3Q8NET8 790 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 NT5CQ8TCD5 201 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 FIG4Q92562 907 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 S100PBPQ96BU1 408 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 MUCL1Q96DR8 90 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 FAHD2AQ96GK7 314 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 SENP5Q96HI0 755 aaPredicted RBP3.44□□□□□ -1.86
RNF4-211ENST00000509206 TMEM41AQ96HV5 264 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 RADILQ96JH8 1075 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 HIST1H2AHQ96KK5 128 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 FOXN4Q96NZ1 517 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 DGAT2Q96PD7 388 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 HIST1H2AJQ99878 128 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 DHRS9Q9BPW9 319 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 HAUS8Q9BT25 410 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 H2AFJQ9BTM1 129 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 NPLQ9BXD5 320 aaPredicted RBP3.44□□□□□ -1.86
RNF4-211ENST00000509206 PINK1Q9BXM7 581 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 TRIM2Q9C040 744 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 OR10A4Q9H209 315 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 MMP27Q9H306 513 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 UBQLN3Q9H347 655 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 CDC42EP4Q9H3Q1 356 aaKnown RBP3.44□□□□□ -1.86
RNF4-211ENST00000509206 C10orf88Q9H8K7 445 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 LRRC40Q9H9A6 602 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 COPS7BQ9H9Q2 264 aaPredicted RBP3.44□□□□□ -1.86
RNF4-211ENST00000509206 SERHLQ9NQF3 203 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 SMYD2Q9NRG4 433 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 CATSPERZQ9NTU4 200 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 ZNHIT6Q9NWK9 470 aaKnown RBP3.44□□□□□ -1.86
RNF4-211ENST00000509206 PIH1D1Q9NWS0 290 aaKnown RBP3.44□□□□□ -1.86
RNF4-211ENST00000509206 KLRF1Q9NZS2 232 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 FETUBQ9UGM5 382 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 ZFP69BQ9UJL9 534 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 FBXL7Q9UJT9 491 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 DKKL1Q9UK85 242 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 AMFRQ9UKV5 643 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 MYO6Q9UM54 1294 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 USP22Q9UPT9 525 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 SH2B3Q9UQQ2 575 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 GRIP1Q9Y3R0 1128 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 MAD1L1Q9Y6D9 718 aa3.44□□□□□ -1.86
RNF4-211ENST00000509206 PRKDCP78527 4128 aaKnown RBP3.44□□□□□ -1.86
RNF4-211ENST00000509206 BIRC6Q9NR09 4857 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 FREM3P0C091 2139 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 RAI1Q7Z5J4 1906 aaPredicted RBP3.43□□□□□ -1.86
RNF4-211ENST00000509206 NPIPA5A0A0B4J1W7 369 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 A0A0G2JN53 185 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 C2orf92A0A1B0GVN3 265 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 TRBC2A0A5B9 178 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 LRP5LA4QPB2 252 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 MROH6A6NGR9 719 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 NPIPA7E9PJI5 369 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 ABCD4O14678 606 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 SEC14L5O43304 696 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 RAMP1O60894 148 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 H2AFYO75367 372 aaKnown RBP3.43□□□□□ -1.86
RNF4-211ENST00000509206 ETHE1O95571 254 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 CGAP01215 116 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 PTMAP06454 111 aaKnown RBP3.43□□□□□ -1.86
RNF4-211ENST00000509206 H2AFZP0C0S5 128 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 NPIPA8P0DM63 369 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 FCGR2AP12318 317 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 PECAM1P16284 738 aaPredicted RBP3.43□□□□□ -1.86
RNF4-211ENST00000509206 RPS3P23396 243 aaKnown RBP eCLIP3.43□□□□□ -1.86
RNF4-211ENST00000509206 FPR2P25090 351 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 ADRA1DP25100 572 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms