RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 GALNT18Q6P9A2 607 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 ANGPTL8Q6UXH0 198 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 MEX3BQ6ZN04 569 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 ACAD11Q709F0 780 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 GDF7Q7Z4P5 450 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 LURAP1LQ8IV03 231 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 OR7G2Q8NG99 324 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 AGR3Q8TD06 166 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 ZNF675Q8TD23 568 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 ASB5Q8WWX0 329 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 HGDQ93099 445 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 GFM2Q969S9 779 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 TMBIM1Q969X1 311 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 ZBTB9Q96C00 473 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 HSPBAP1Q96EW2 488 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 FAM111AQ96PZ2 611 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 GATA5Q9BWX5 397 aaPredicted RBP13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 OSBPL11Q9BXB4 747 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 TRIM8Q9BZR9 551 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 FOLH1BQ9HBA9 442 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 RRAGDQ9NQL2 400 aaPredicted RBP13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 SLC17A7Q9P2U7 560 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 MID2Q9UJV3 735 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 MAPRE3Q9UPY8 281 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 C15orf41Q9Y2V0 281 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 SLC6A5Q9Y345 797 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 ADGRG4Q8IZF6 3080 aa13.55□□□□□ -0.24
UBE2D3-228ENST00000508974 KIAA1549Q9HCM3 1950 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 FRG2CA6NGY1 282 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 TMEM233B4DJY2 109 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 AZIN1O14977 448 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 ACOX3O15254 700 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 ERN1O75460 977 aaKnown RBP13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 REM1O75628 298 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 RSL1D1O76021 490 aaKnown RBP13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 SNX4O95219 450 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 DRD5P21918 477 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 TACR1P25103 407 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 ALDH3A1P30838 453 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 MPIP34949 423 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 PTGER4P35408 488 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 MC3RP41968 323 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 PPICP45877 212 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 WNT3P56703 355 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 NAA20P61599 178 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 EIPR1Q53HC9 387 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 WIPI1Q5MNZ9 446 aaPredicted RBP13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 SH2D4BQ5SQS7 431 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 FAM71E1Q6IPT2 247 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 ANKRD26P1Q6NSI1 321 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 TMEM107Q6UX40 140 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 NPSR1Q6W5P4 371 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 ZCCHC23Q6ZST2 131 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 NUP54Q7Z3B4 507 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 TRIM46Q7Z4K8 759 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 TRABD2AQ86V40 505 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 SAMD14Q8IZD0 417 aaPredicted RBP13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 BANPQ8N9N5 519 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 OR1J4Q8NGS1 313 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 EGLN2Q96KS0 407 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 SECISBP2Q96T21 854 aaKnown RBP13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 ACKR4Q9NPB9 350 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 MYNNQ9NPC7 610 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 QPCTLQ9NXS2 382 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 GPR55Q9Y2T6 319 aaPredicted RBP13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 MYO9AB2RTY4 2548 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 CSMD2Q7Z408 3487 aa13.54□□□□□ -0.24
UBE2D3-228ENST00000508974 A0A0G2JNJ9 132 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 PRAMEF25A6NGN4 478 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 KDM4EB2RXH2 506 aaPredicted RBP13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 H3BQF6 201 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 TRIM13O60858 407 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 WDR1O75083 606 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 ICOSLGO75144 302 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 CHRNGP07510 517 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 NUDT17P0C025 328 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 LINC00032P0C843 101 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 IL12BP29460 328 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 NTSP30990 170 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 KRT20P35900 424 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 ADH7P40394 386 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 PTGDSP41222 190 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 CDK9P50750 372 aaKnown RBP13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 DCAF7P61962 342 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 WDR53Q7Z5U6 358 aaPredicted RBP13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 YRDCQ86U90 279 aaKnown RBP13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 SLC44A2Q8IWA5 706 aaPredicted RBP13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 ULK2Q8IYT8 1036 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 ZNF295-AS1Q8N0V1 137 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 RIBC1Q8N443 379 aaPredicted RBP13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 OR4N2Q8NGD1 307 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 OR2T11Q8NH01 316 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 LILRB4Q8NHJ6 448 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 CLHC1Q8NHS4 586 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 AENQ8WTP8 325 aaKnown RBP13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 EFHD2Q96C19 240 aaPredicted RBP13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 TMEM41AQ96HV5 264 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 VSTM2LQ96N03 204 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 COL21A1Q96P44 957 aa13.53□□□□□ -0.24
UBE2D3-228ENST00000508974 ADOQ96SZ5 270 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms