RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 RRAS2P62070 204 aaPredicted RBP4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 TSPAN5P62079 268 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 EEF1A1P68104 462 aaKnown RBP4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 SLC35A2P78381 396 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 EEF1A2Q05639 463 aaKnown RBP4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 PUDPQ08623 228 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 FGL1Q08830 312 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 DMWDQ09019 674 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 GBX1Q14549 363 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 EMC2Q15006 297 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 LTB4RQ15722 352 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 UGT3A2Q3SY77 523 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 ANXA2RQ3ZCQ2 193 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 RNF212Q495C1 297 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 CDNFQ49AH0 187 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 PIK3CD-AS1Q5SR53 167 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 EEF1A1P5Q5VTE0 462 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 ZNF691Q5VV52 312 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 MLIPQ5VWP3 458 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 ZNF324BQ6AW86 544 aaPredicted RBP4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 ZNF470Q6ECI4 717 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 PM20D1Q6GTS8 502 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 PYHIN1Q6K0P9 492 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 LIN54Q6MZP7 749 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 MFSD7Q6UXD7 560 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 TMPRSS11AQ6ZMR5 421 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 UTS2BQ765I0 119 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 EIF3MQ7L2H7 374 aaKnown RBP4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 PIWIL3Q7Z3Z3 882 aaKnown RBP4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 HSD17B13Q7Z5P4 300 aaPredicted RBP4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 NRARPQ7Z6K4 114 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 EPHX4Q8IUS5 362 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 SLC22A9Q8IVM8 553 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 STPG2Q8N412 459 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 CERS5Q8N5B7 392 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 YIPF7Q8N8F6 280 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 C12orf29Q8N999 325 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 C19orf18Q8NEA5 215 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 ZMIZ2Q8NF64 920 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 OR52L2PQ8NGH6 319 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 OR9Q1Q8NGQ5 310 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 ELP5Q8TE02 316 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 OIT3Q8WWZ8 545 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 ASB12Q8WXK4 309 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 MARC2Q969Z3 335 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 FOPNLQ96NB1 174 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 OR2A14Q96R47 310 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 OR52B2Q96RD2 323 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 GAD1Q99259 594 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 NPAS2Q99743 824 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 NTPCRQ9BSD7 190 aaKnown RBP4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 STRA6Q9BX79 667 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 TRIM2Q9C040 744 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 ZNF436Q9C0F3 470 aaPredicted RBP4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 C20orf27Q9GZN8 174 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 POLR1EQ9GZS1 481 aaKnown RBP4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 SHARPINQ9H0F6 387 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 DNTTIP1Q9H147 329 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 NCOR1P1Q9H4R4 102 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 TDRD3Q9H7E2 651 aaKnown RBP4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 MEAF6Q9HAF1 191 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 VAT1LQ9HCJ6 419 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 RANGRFQ9HD47 186 aaPredicted RBP4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 ACP6Q9NPH0 428 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 RASSF1Q9NS23 344 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 ABCC13Q9NSE7 274 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 EXD2Q9NVH0 621 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 COPZ2Q9P299 210 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 RNF6Q9Y252 685 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 DTX4Q9Y2E6 619 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 GMPPBQ9Y5P6 360 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 MAGED1Q9Y5V3 778 aaPredicted RBP4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 AP1M2Q9Y6Q5 423 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 COL2A1P02458 1487 aaPredicted RBP4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 WDFY4Q6ZS81 3184 aa4.29□□□□□ -1.72
PDLIM5-211ENST00000508531 XIRP2A4UGR9 3374 aa4.29□□□□□ -1.72
PDLIM5-211ENST00000508531 LOC390937A0A1W2PQ73 354 aa4.29□□□□□ -1.72
PDLIM5-211ENST00000508531 OR2A25A4D2G3 310 aa4.29□□□□□ -1.72
PDLIM5-211ENST00000508531 ERI2A8K979 691 aaKnown RBP4.29□□□□□ -1.72
PDLIM5-211ENST00000508531 HACD1B0YJ81 288 aa4.29□□□□□ -1.72
PDLIM5-211ENST00000508531 TEX46H3BTG2 121 aa4.29□□□□□ -1.72
PDLIM5-211ENST00000508531 SULT1C2O00338 296 aa4.29□□□□□ -1.72
PDLIM5-211ENST00000508531 E2F3O00716 465 aa4.29□□□□□ -1.72
PDLIM5-211ENST00000508531 GNGT2O14610 69 aa4.29□□□□□ -1.72
PDLIM5-211ENST00000508531 PRMT5O14744 637 aaPredicted RBP4.29□□□□□ -1.72
PDLIM5-211ENST00000508531 BCKDKO14874 412 aa4.29□□□□□ -1.72
PDLIM5-211ENST00000508531 INPP4BO15327 924 aa4.29□□□□□ -1.72
PDLIM5-211ENST00000508531 MED7O43513 233 aa4.29□□□□□ -1.72
PDLIM5-211ENST00000508531 SCN2BO60939 215 aa4.29□□□□□ -1.72
PDLIM5-211ENST00000508531 STX11O75558 287 aa4.29□□□□□ -1.72
PDLIM5-211ENST00000508531 RECQL5O94762 991 aaPredicted RBP4.29□□□□□ -1.72
PDLIM5-211ENST00000508531 CCNB2O95067 398 aa4.29□□□□□ -1.72
PDLIM5-211ENST00000508531 LGI1O95970 557 aa4.29□□□□□ -1.72
PDLIM5-211ENST00000508531 ALDOAP04075 364 aaKnown RBP4.29□□□□□ -1.72
PDLIM5-211ENST00000508531 C2P06681 752 aa4.29□□□□□ -1.72
PDLIM5-211ENST00000508531 ZSCAN5DPP0CG00 497 aa4.29□□□□□ -1.72
PDLIM5-211ENST00000508531 HSMCR30P0CW71 290 aa4.29□□□□□ -1.72
PDLIM5-211ENST00000508531 CSH1P0DML2 217 aa4.29□□□□□ -1.72
PDLIM5-211ENST00000508531 CSH2P0DML3 217 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms