RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 ZSCAN5AQ9BUG6 496 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 WRAP53Q9BUR4 548 aaKnown RBP3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 PAPOLGQ9BWT3 736 aaKnown RBP3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 VCX2Q9H322 139 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 DCTPP1Q9H773 170 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 POLD4Q9HCU8 107 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 TECRQ9NZ01 308 aaKnown RBP3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 FOXJ3Q9UPW0 622 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 SLC6A5Q9Y345 797 aa3.43□□□□□ -1.86
TRAPPC13-209ENST00000508304 A0A1W2PR80 420 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 SHISA7A6NL88 538 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 MEI4A8MW99 385 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 SURF4O15260 269 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 BUB1O43683 1085 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 NUDT21O43809 227 aaKnown RBP3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 FGF19O95750 216 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 HPRP00739 348 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 IGHV3-13P01766 116 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 SLC35G4P0C7Q5 338 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 CAPN2P17655 700 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 C4BPBP20851 252 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 DRD5P21918 477 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 PTPN6P29350 595 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 SOX3P41225 446 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 XGP55808 180 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 RAG2P55895 527 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 COX10Q12887 443 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 IL24Q13007 206 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 KLF5Q13887 457 aaPredicted RBP3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 TATDN3Q17R31 274 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 SHROOM1Q2M3G4 852 aaPredicted RBP3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 SPANXN4Q5MJ08 99 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 BEND6Q5SZJ8 279 aaPredicted RBP3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 DCAF12Q5T6F0 453 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 NIPAL3Q6P499 406 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 LEKR1Q6ZMV7 388 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 DPY19L2P2Q6ZN68 376 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 CCDC36Q8IYA8 594 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 ZNF397Q8NF99 534 aaPredicted RBP3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 C8orf46Q8TAG6 207 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 MCHR2Q969V1 340 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 SLC45A3Q96JT2 553 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 SENP8Q96LD8 212 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 C2orf48Q96LS8 159 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 JPH2Q9BR39 696 aaPredicted RBP3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 ALG12Q9BV10 488 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 CAPS2Q9BXY5 557 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 KAT8Q9H7Z6 458 aaKnown RBP3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 SLC25A19Q9HC21 320 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 C1orf123Q9NWV4 160 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 SMPD3Q9NY59 655 aaPredicted RBP3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 EIF3KQ9UBQ5 218 aaKnown RBP3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 MIOXQ9UGB7 285 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 CTNNA3Q9UI47 895 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 LNPEPQ9UIQ6 1025 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 OR10H1Q9Y4A9 318 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 WIPI2Q9Y4P8 454 aa3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 TDRD15B5MCY1 1934 aaKnown RBP3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 SF3B1O75533 1304 aaKnown RBP eCLIP3.42□□□□□ -1.86
TRAPPC13-209ENST00000508304 FGD5Q6ZNL6 1462 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 KDRP35968 1356 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 LOC105371242A0A075B767 164 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 A0A0J9YVX5 310 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 NEDD8-MDP1E9PL57 170 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 H3BTX0 84 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 AP3B1O00203 1094 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 EI24O14681 340 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 TFECO14948 347 aaPredicted RBP3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 LRCH4O75427 683 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 UQCRBP14927 111 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 GLRA1P23415 457 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 PSMA2P25787 234 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 CALML3P27482 149 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 RPL9P32969 192 aaKnown RBP3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 ID1P41134 155 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 FHITP49789 147 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 BACE1P56817 501 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 CBX1P83916 185 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 PAX8Q06710 450 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 BNIP1Q12981 228 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 EXOSC2Q13868 293 aaKnown RBP3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 KCTD21Q4G0X4 260 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 ASPHD2Q6ICH7 369 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 STEAP1BQ6NZ63 245 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 FRRS1Q6ZNA5 592 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 SLC22A16Q86VW1 577 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 WDR49Q8IV35 697 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 EFCAB13Q8IY85 973 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 EIF1ADQ8N9N8 165 aaKnown RBP3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 RELL2Q8NC24 303 aaPredicted RBP3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 FBXO25Q8TCJ0 367 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 CD99L2Q8TCZ2 262 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 RLN3Q8WXF3 142 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 ELMO2Q96JJ3 720 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 C4orf36Q96KX1 117 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 LURAP1Q96LR2 239 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 PRICKLE1Q96MT3 831 aaPredicted RBP3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 VSTM2LQ96N03 204 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 ACCSQ96QU6 501 aa3.41□□□□□ -1.86
TRAPPC13-209ENST00000508304 RAB40CQ96S21 281 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms