RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 ZNF675Q8TD23 568 aa10.24□□□□□ -0.77
PDLIM5-210ENST00000508216 C16orf78Q8WTQ4 265 aa10.24□□□□□ -0.77
PDLIM5-210ENST00000508216 TMEM174Q8WUU8 243 aa10.24□□□□□ -0.77
PDLIM5-210ENST00000508216 CNOT9Q92600 299 aaKnown RBP10.24□□□□□ -0.77
PDLIM5-210ENST00000508216 RSC1A1Q92681 617 aa10.24□□□□□ -0.77
PDLIM5-210ENST00000508216 PTCHD1Q96NR3 888 aa10.24□□□□□ -0.77
PDLIM5-210ENST00000508216 EBNA1BP2Q99848 306 aaKnown RBP10.24□□□□□ -0.77
PDLIM5-210ENST00000508216 ALG8Q9BVK2 526 aa10.24□□□□□ -0.77
PDLIM5-210ENST00000508216 KIR3DX1Q9H7L2 352 aa10.24□□□□□ -0.77
PDLIM5-210ENST00000508216 TMEM138Q9NPI0 162 aa10.24□□□□□ -0.77
PDLIM5-210ENST00000508216 POT1Q9NUX5 634 aa10.24□□□□□ -0.77
PDLIM5-210ENST00000508216 DZANK1Q9NVP4 752 aa10.24□□□□□ -0.77
PDLIM5-210ENST00000508216 TMEM45AQ9NWC5 275 aa10.24□□□□□ -0.77
PDLIM5-210ENST00000508216 RASL12Q9NYN1 266 aa10.24□□□□□ -0.77
PDLIM5-210ENST00000508216 H2AFY2Q9P0M6 372 aaPredicted RBP10.24□□□□□ -0.77
PDLIM5-210ENST00000508216 PSORS1C1Q9UIG5 152 aa10.24□□□□□ -0.77
PDLIM5-210ENST00000508216 GDF2Q9UK05 429 aaPredicted RBP10.24□□□□□ -0.77
PDLIM5-210ENST00000508216 COL1A2P08123 1366 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 SERTM2A0A1B0GWG4 89 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 LRRC14BA6NHZ5 514 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 NEMP1O14524 444 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 RDH16O75452 317 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 CTAG2O75638 210 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 IFNB1P01574 187 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 CD2P06729 351 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 NDUFS1P28331 727 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 EVX1P49640 407 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 PRRX1P54821 245 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 REEP5Q00765 189 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 TCP10Q12799 353 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 MAMLD1Q13495 774 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 PGM5Q15124 567 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 EXOC3L2Q2M3D2 409 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 ERFEQ4G0M1 354 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 AGKQ53H12 422 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 PYDC2Q56P42 97 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 C10orf120Q5SQS8 335 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 WSCD1Q658N2 575 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 GCNT7Q6ZNI0 430 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 IFNEQ86WN2 208 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 CMIPQ8IY22 773 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 ACBD4Q8NC06 268 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 OR56A4Q8NGH8 313 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 OR52N4Q8NGI2 321 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 TMEM125Q96AQ2 219 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 FAM120BQ96EK7 910 aaKnown RBP10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 TCTN2Q96GX1 697 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 PIWIL1Q96J94 861 aaKnown RBP10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 CCDC74BQ96LY2 380 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 FAM193BQ96PV7 902 aaPredicted RBP10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 C7orf50Q9BRJ6 194 aaKnown RBP10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 CHCHD6Q9BRQ6 235 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 WRAP53Q9BUR4 548 aaKnown RBP10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 ASPNQ9BXN1 380 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 MEAF6Q9HAF1 191 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 SLC6A20Q9NP91 592 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 CHST11Q9NPF2 352 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 BTRCQ9Y297 605 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 SHANK3Q9BYB0 1731 aa10.23□□□□□ -0.77
PDLIM5-210ENST00000508216 M0R143 59 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 SCAMP3O14828 347 aaKnown RBP10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 SLC37A4O43826 429 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 NDUFB10O96000 172 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 GIPP09681 153 aaPredicted RBP10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 ALDOCP09972 364 aaKnown RBP10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 C1GALT1C1LP0DN25 315 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 CXCL2P19875 107 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 NFYAP23511 347 aaPredicted RBP10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 MST1P26927 711 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 CERS1P27544 350 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 TAGLN2P37802 199 aaKnown RBP10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 PXNP49023 591 aaPredicted RBP10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 GSK3BP49841 420 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 YBEYP58557 167 aaPredicted RBP10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 RAC3P60763 192 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 ARF6P62330 175 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 LCP2Q13094 533 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 TAZQ16635 292 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 TFDP3Q5H9I0 405 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 RABL3Q5HYI8 236 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 ZNF468Q5VIY5 522 aaPredicted RBP10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 LAIR1Q6GTX8 287 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 LCLAT1Q6UWP7 414 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 CES3Q6UWW8 571 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 UNQ6494/PRO21346Q6UXR6 183 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 RNF165Q6ZSG1 346 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 SLC34A3Q8N130 599 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 Q8N402 240 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 SPICQ8N5J4 248 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 OR2T35Q8NGX2 323 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 OR6K3Q8NGY3 331 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 TMEM163Q8TC26 289 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 TFGQ92734 400 aaPredicted RBP10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 HIST1H2BAQ96A08 127 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 SLC25A46Q96AG3 418 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 PHYHIPLQ96FC7 376 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 DIRAS2Q96HU8 199 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 SMIM8Q96KF7 97 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 CLUHP3Q96NS8 147 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 ZNF426Q9BUY5 554 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms