RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, human

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-210	ENST00000507965		Q8N1Y9	231 aa		5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	SLC35F6	Q8N357	371 aa		5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	LRRC25	Q8N386	305 aa	Predicted RBP	5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	FBXW8	Q8N3Y1	598 aa		5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	NKAP	Q8N5F7	415 aa	Known RBP	5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	ACOT4	Q8N9L9	421 aa		5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	MYRIP	Q8NFW9	859 aa		5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	TTL	Q8NG68	377 aa		5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	OR8K3	Q8NH51	312 aa		5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	GABPB2	Q8TAK5	448 aa	Predicted RBP	5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965		Q8TCH9	128 aa		5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	ACTRT1	Q8TDG2	376 aa		5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	GRK7	Q8WTQ7	553 aa		5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	DAZL	Q92904	295 aa	Known RBP	5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	PPWD1	Q96BP3	646 aa	Known RBP	5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	SARAF	Q96BY9	339 aa		5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	SPACA9	Q96E40	222 aa	Predicted RBP	5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	PTCD3	Q96EY7	689 aa	Known RBP	5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	VPS39	Q96JC1	886 aa		5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	PBK	Q96KB5	322 aa		5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	JSRP1	Q96MG2	331 aa	Predicted RBP	5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	GAL3ST4	Q96RP7	486 aa		5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	NAT9	Q9BTE0	207 aa		5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	MS4A8	Q9BY19	250 aa		5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	CDIP1	Q9H305	208 aa		5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	NT5DC2	Q9H857	520 aa		5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	SMYD2	Q9NRG4	433 aa		5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	DNAJC11	Q9NVH1	559 aa		5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	WWOX	Q9NZC7	414 aa		5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	CTNNAL1	Q9UBT7	734 aa		5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	COPS7A	Q9UBW8	275 aa		5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	JRKL	Q9Y4A0	524 aa		5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	5.07	□□□□□ -1.6
ATXN3-210	ENST00000507965	VPS13C	Q709C8	3753 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965		A0A088AWK7	358 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	C15orf38-AP3S2	A0A0A6YYH1	394 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	GOLGA6L10	A0A0M3HER8	536 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	GLOD5	A6NK44	160 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	WASHC1	A8K0Z3	465 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	CXorf49	A8MYA2	514 aa	Predicted RBP	5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	CCNT2	O60583	730 aa	Known RBP	5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	HCN1	O60741	890 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	H2AFY	O75367	372 aa	Known RBP	5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	RAF1	P04049	648 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	CCDC166	P0CW27	439 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	PCNA	P12004	261 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	ZNF10	P21506	573 aa	Predicted RBP	5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	HIST1H1T	P22492	207 aa	Predicted RBP	5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	CPN2	P22792	545 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	DNASE1	P24855	282 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	ATP5A1	P25705	553 aa	Known RBP	5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	GDF1	P27539	372 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	GSTM2	P28161	218 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	STT3A	P46977	705 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	ZNF136	P52737	540 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	DGKQ	P52824	942 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	HNRNPH2	P55795	449 aa	Known RBP	5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	HERVK_113	P63132	956 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	ERVK-8	P63133	956 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	IGLV3-21	P80748	117 aa	Predicted RBP	5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	TNFRSF17	Q02223	184 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	LTB	Q06643	244 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	MGAT5	Q09328	741 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	DUSP8	Q13202	625 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	CHIT1	Q13231	466 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	FOXE3	Q13461	319 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	DDX39B	Q13838	428 aa	Known RBP	5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	SERTAD2	Q14140	314 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	SLC10A1	Q14973	349 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	EFTUD2	Q15029	972 aa	Known RBP eCLIP	5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	EBP	Q15125	230 aa	Known RBP	5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	MPEG1	Q2M385	716 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	PIGG	Q5H8A4	983 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	C18orf63	Q68DL7	685 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	PLXDC2	Q6UX71	529 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	FKBP9P1	Q75LS8	142 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	GPSM1	Q86YR5	675 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	KLHL7	Q8IXQ5	586 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	PDIK1L	Q8N165	341 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	KLHL36	Q8N4N3	616 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	PDPR	Q8NCN5	879 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	FBXO36	Q8NEA4	188 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	OR5L2	Q8NGL0	311 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	NEIL3	Q8TAT5	605 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	NUBPL	Q8TB37	319 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	SLC22A8	Q8TCC7	542 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	PAQR8	Q8TEZ7	354 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	ZNF473	Q8WTR7	871 aa	Known RBP	5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	UCN3	Q969E3	161 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	WDR34	Q96EX3	536 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	SENP5	Q96HI0	755 aa	Predicted RBP	5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	FBXL20	Q96IG2	436 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	SGCZ	Q96LD1	299 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	ZNF597	Q96LX8	424 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	DGAT2	Q96PD7	388 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	DOHH	Q9BU89	302 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	EFCAB11	Q9BUY7	163 aa		5.06	□□□□□ -1.6
ATXN3-210	ENST00000507965	ERVK-6	Q9BXR3	956 aa		5.06	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 47 ms