RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 MATN1P21941 496 aa18.59■□□□□ 0.57
USP53-203ENST00000507597 NFYCQ13952 458 aa18.59■□□□□ 0.57
USP53-203ENST00000507597 LASP1Q14847 261 aaKnown RBP18.59■□□□□ 0.57
USP53-203ENST00000507597 CYP27C1Q4G0S4 372 aa18.59■□□□□ 0.57
USP53-203ENST00000507597 LRIF1Q5T3J3 769 aa18.59■□□□□ 0.57
USP53-203ENST00000507597 ATAD3BQ5T9A4 648 aa18.59■□□□□ 0.57
USP53-203ENST00000507597 MFSD12Q6NUT3 480 aa18.59■□□□□ 0.57
USP53-203ENST00000507597 CDC73Q6P1J9 531 aa18.59■□□□□ 0.57
USP53-203ENST00000507597 SNX32Q86XE0 403 aa18.59■□□□□ 0.57
USP53-203ENST00000507597 SLC9A6Q92581 669 aa18.59■□□□□ 0.57
USP53-203ENST00000507597 ADIPOR1Q96A54 375 aa18.59■□□□□ 0.57
USP53-203ENST00000507597 VSTM2LQ96N03 204 aa18.59■□□□□ 0.57
USP53-203ENST00000507597 STACQ99469 402 aa18.59■□□□□ 0.57
USP53-203ENST00000507597 INPP5KQ9BT40 448 aa18.59■□□□□ 0.57
USP53-203ENST00000507597 ITPAQ9BY32 194 aa18.59■□□□□ 0.57
USP53-203ENST00000507597 SLC52A3Q9NQ40 469 aa18.59■□□□□ 0.57
USP53-203ENST00000507597 SERHLQ9NQF3 203 aa18.59■□□□□ 0.57
USP53-203ENST00000507597 EXD2Q9NVH0 621 aa18.59■□□□□ 0.57
USP53-203ENST00000507597 GPR55Q9Y2T6 319 aaPredicted RBP18.59■□□□□ 0.57
USP53-203ENST00000507597 ANKRD11Q6UB99 2663 aaPredicted RBP18.59■□□□□ 0.57
USP53-203ENST00000507597 ACACBO00763 2458 aa18.59■□□□□ 0.57
USP53-203ENST00000507597 CACNA1BQ00975 2339 aa18.58■□□□□ 0.57
USP53-203ENST00000507597 TMEM247A6NEH6 219 aa18.58■□□□□ 0.56
USP53-203ENST00000507597 A8MVJ9 347 aa18.58■□□□□ 0.56
USP53-203ENST00000507597 MRASO14807 208 aa18.58■□□□□ 0.56
USP53-203ENST00000507597 TO15178 435 aa18.58■□□□□ 0.56
USP53-203ENST00000507597 DPM1O60762 260 aa18.58■□□□□ 0.56
USP53-203ENST00000507597 ABCB7O75027 752 aa18.58■□□□□ 0.56
USP53-203ENST00000507597 OR2J2O76002 312 aa18.58■□□□□ 0.56
USP53-203ENST00000507597 AK1P00568 194 aa18.58■□□□□ 0.56
USP53-203ENST00000507597 CYB561P49447 251 aa18.58■□□□□ 0.56
USP53-203ENST00000507597 KHKP50053 298 aa18.58■□□□□ 0.56
USP53-203ENST00000507597 ARG2P78540 354 aa18.58■□□□□ 0.56
USP53-203ENST00000507597 RAPSNQ13702 412 aa18.58■□□□□ 0.56
USP53-203ENST00000507597 DECR1Q16698 335 aa18.58■□□□□ 0.56
USP53-203ENST00000507597 SAXO2Q658L1 398 aa18.58■□□□□ 0.56
USP53-203ENST00000507597 FAM91A1Q658Y4 838 aa18.58■□□□□ 0.56
USP53-203ENST00000507597 LINC00696Q6ZRV3 163 aa18.58■□□□□ 0.56
USP53-203ENST00000507597 DHDDSQ86SQ9 333 aa18.58■□□□□ 0.56
USP53-203ENST00000507597 SLC44A2Q8IWA5 706 aaPredicted RBP18.58■□□□□ 0.56
USP53-203ENST00000507597 OR5AK3PQ8NH89 298 aa18.58■□□□□ 0.56
USP53-203ENST00000507597 C9orf43Q8TAL5 461 aaPredicted RBP18.58■□□□□ 0.56
USP53-203ENST00000507597 GPR151Q8TDV0 419 aa18.58■□□□□ 0.56
USP53-203ENST00000507597 HAS2Q92819 552 aa18.58■□□□□ 0.56
USP53-203ENST00000507597 PAIP1Q9H074 479 aaKnown RBP18.58■□□□□ 0.56
USP53-203ENST00000507597 ANKRA2Q9H9E1 313 aa18.58■□□□□ 0.56
USP53-203ENST00000507597 TPT1P8Q9HAU6 139 aa18.58■□□□□ 0.56
USP53-203ENST00000507597 DUSP22Q9NRW4 184 aa18.58■□□□□ 0.56
USP53-203ENST00000507597 HPF1Q9NWY4 346 aa18.58■□□□□ 0.56
USP53-203ENST00000507597 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.58■□□□□ 0.56
USP53-203ENST00000507597 AP3M1Q9Y2T2 418 aa18.58■□□□□ 0.56
USP53-203ENST00000507597 TPRP12270 2363 aaKnown RBP18.57■□□□□ 0.56
USP53-203ENST00000507597 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.57■□□□□ 0.56
USP53-203ENST00000507597 TP53I11O14683 189 aa18.57■□□□□ 0.56
USP53-203ENST00000507597 ASNA1O43681 348 aa18.57■□□□□ 0.56
USP53-203ENST00000507597 HS6ST1O60243 411 aa18.57■□□□□ 0.56
USP53-203ENST00000507597 PRKNO60260 465 aaPredicted RBP18.57■□□□□ 0.56
USP53-203ENST00000507597 GSNP06396 782 aa18.57■□□□□ 0.56
USP53-203ENST00000507597 TRHRP34981 398 aaPredicted RBP18.57■□□□□ 0.56
USP53-203ENST00000507597 SOX18P35713 384 aa18.57■□□□□ 0.56
USP53-203ENST00000507597 OC90Q02509 493 aaPredicted RBP18.57■□□□□ 0.56
USP53-203ENST00000507597 ART3Q13508 389 aa18.57■□□□□ 0.56
USP53-203ENST00000507597 TRMT5Q32P41 509 aaKnown RBP18.57■□□□□ 0.56
USP53-203ENST00000507597 PAGE3Q5JUK9 113 aa18.57■□□□□ 0.56
USP53-203ENST00000507597 B3GNTL1Q67FW5 361 aaPredicted RBP18.57■□□□□ 0.56
USP53-203ENST00000507597 FCRLBQ6BAA4 426 aa18.57■□□□□ 0.56
USP53-203ENST00000507597 IGFL2Q6UWQ7 119 aa18.57■□□□□ 0.56
USP53-203ENST00000507597 SLC34A3Q8N130 599 aa18.57■□□□□ 0.56
USP53-203ENST00000507597 ZNF441Q8N8Z8 693 aa18.57■□□□□ 0.56
USP53-203ENST00000507597 MIPOL1Q8TD10 442 aa18.57■□□□□ 0.56
USP53-203ENST00000507597 TMEM125Q96AQ2 219 aa18.57■□□□□ 0.56
USP53-203ENST00000507597 ROPN1LQ96C74 230 aa18.57■□□□□ 0.56
USP53-203ENST00000507597 GIMAP5Q96F15 307 aa18.57■□□□□ 0.56
USP53-203ENST00000507597 ABHD17AQ96GS6 310 aa18.57■□□□□ 0.56
USP53-203ENST00000507597 SGCZQ96LD1 299 aa18.57■□□□□ 0.56
USP53-203ENST00000507597 RASL10BQ96S79 203 aa18.57■□□□□ 0.56
USP53-203ENST00000507597 PIGUQ9H490 435 aa18.57■□□□□ 0.56
USP53-203ENST00000507597 ERVK-11Q9UQG0 969 aa18.57■□□□□ 0.56
USP53-203ENST00000507597 PCDHB14Q9Y5E9 798 aa18.57■□□□□ 0.56
USP53-203ENST00000507597 NPFFR2Q9Y5X5 522 aa18.57■□□□□ 0.56
USP53-203ENST00000507597 DMXL2Q8TDJ6 3036 aa18.56■□□□□ 0.56
USP53-203ENST00000507597 CLIC1O00299 241 aa18.56■□□□□ 0.56
USP53-203ENST00000507597 NKX2-2O95096 273 aa18.56■□□□□ 0.56
USP53-203ENST00000507597 IL12BP29460 328 aa18.56■□□□□ 0.56
USP53-203ENST00000507597 GABRA3P34903 492 aa18.56■□□□□ 0.56
USP53-203ENST00000507597 CDKN2CP42773 168 aa18.56■□□□□ 0.56
USP53-203ENST00000507597 HLCSP50747 726 aa18.56■□□□□ 0.56
USP53-203ENST00000507597 PLCXD2Q0VAA5 305 aa18.56■□□□□ 0.56
USP53-203ENST00000507597 FADDQ13158 208 aa18.56■□□□□ 0.56
USP53-203ENST00000507597 DUSP8Q13202 625 aa18.56■□□□□ 0.56
USP53-203ENST00000507597 KRT72Q14CN4 511 aa18.56■□□□□ 0.56
USP53-203ENST00000507597 LACTB2Q53H82 288 aaPredicted RBP18.56■□□□□ 0.56
USP53-203ENST00000507597 REP15Q6BDI9 236 aa18.56■□□□□ 0.56
USP53-203ENST00000507597 IGFL3Q6UXB1 125 aa18.56■□□□□ 0.56
USP53-203ENST00000507597 DNAJC14Q6Y2X3 702 aaPredicted RBP18.56■□□□□ 0.56
USP53-203ENST00000507597 BEST3Q8N1M1 668 aa18.56■□□□□ 0.56
USP53-203ENST00000507597 COX18Q8N8Q8 333 aa18.56■□□□□ 0.56
USP53-203ENST00000507597 OR52N2Q8NGI0 321 aa18.56■□□□□ 0.56
USP53-203ENST00000507597 ZFP90Q8TF47 636 aa18.56■□□□□ 0.56
USP53-203ENST00000507597 TTC9Q92623 222 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms