RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 VASNQ6EMK4 673 aa16.73■□□□□ 0.27
NUP54-205ENST00000507257 IQCHQ86VS3 1027 aa16.73■□□□□ 0.27
NUP54-205ENST00000507257 DNAJC5GQ8N7S2 189 aa16.73■□□□□ 0.27
NUP54-205ENST00000507257 DBF4BQ8NFT6 615 aa16.73■□□□□ 0.27
NUP54-205ENST00000507257 LHFPL5Q8TAF8 219 aa16.73■□□□□ 0.27
NUP54-205ENST00000507257 GNPDA2Q8TDQ7 276 aa16.73■□□□□ 0.27
NUP54-205ENST00000507257 SLC5A11Q8WWX8 675 aa16.73■□□□□ 0.27
NUP54-205ENST00000507257 SMPDL3AQ92484 453 aa16.73■□□□□ 0.27
NUP54-205ENST00000507257 SLC9A6Q92581 669 aa16.73■□□□□ 0.27
NUP54-205ENST00000507257 GPA33Q99795 319 aa16.73■□□□□ 0.27
NUP54-205ENST00000507257 TREX2Q9BQ50 279 aaPredicted RBP16.73■□□□□ 0.27
NUP54-205ENST00000507257 ZSCAN5AQ9BUG6 496 aa16.73■□□□□ 0.27
NUP54-205ENST00000507257 ABCG5Q9H222 651 aa16.73■□□□□ 0.27
NUP54-205ENST00000507257 DPAGT1Q9H3H5 408 aa16.73■□□□□ 0.27
NUP54-205ENST00000507257 MARK1Q9P0L2 795 aa16.73■□□□□ 0.27
NUP54-205ENST00000507257 P2RX2Q9UBL9 471 aa16.73■□□□□ 0.27
NUP54-205ENST00000507257 CD84Q9UIB8 345 aa16.73■□□□□ 0.27
NUP54-205ENST00000507257 TSC22D2O75157 780 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 EFEMP2O95967 443 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 RRASP10301 218 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 BMP8BP34820 402 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 OR1D2P34982 312 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 PTGS2P35354 604 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 RNF144AP50876 292 aaPredicted RBP16.72■□□□□ 0.27
NUP54-205ENST00000507257 PCBP4P57723 403 aaKnown RBP16.72■□□□□ 0.27
NUP54-205ENST00000507257 SNTA1Q13424 505 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 LRRC32Q14392 662 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 AANATQ16613 207 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 HENMT1Q5T8I9 393 aaKnown RBP16.72■□□□□ 0.27
NUP54-205ENST00000507257 BCL2L15Q5TBC7 163 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 TMEM65Q6PI78 240 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 TMEM91Q6ZNR0 172 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 RASSF6Q6ZTQ3 369 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 BMP8AQ7Z5Y6 402 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 SLC9B2Q86UD5 537 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 ADGRG3Q86Y34 549 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 LMLNQ96KR4 655 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 WFDC6Q9BQY6 131 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 AIFM2Q9BRQ8 373 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 SPATA5L1Q9BVQ7 753 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 OSGEPL1Q9H4B0 414 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 ERVMER34-1Q9H9K5 563 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 LIN7BQ9HAP6 207 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 BCL2L10Q9HD36 194 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 SLAMF7Q9NQ25 335 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 SIRT3Q9NTG7 399 aaPredicted RBP16.72■□□□□ 0.27
NUP54-205ENST00000507257 EMC3Q9P0I2 261 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 ITM2BQ9Y287 266 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 OR2AG2A6NM03 316 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 SAP18O00422 153 aaKnown RBP16.72■□□□□ 0.27
NUP54-205ENST00000507257 RGS9O75916 674 aaPredicted RBP16.72■□□□□ 0.27
NUP54-205ENST00000507257 NCR1O76036 304 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 PAHP00439 452 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 CTSAP10619 480 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 NPR2P20594 1047 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 VIPR1P32241 457 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 CD70P32970 193 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 SOX18P35713 384 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 CD79BP40259 229 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 MANFP55145 182 aaKnown RBP16.72■□□□□ 0.27
NUP54-205ENST00000507257 RPS26P62854 115 aaKnown RBP16.72■□□□□ 0.27
NUP54-205ENST00000507257 TSPAN31Q12999 210 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 MLC1Q15049 377 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 TAF12Q16514 161 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 AADACL4Q5VUY2 407 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 TPGS2Q68CL5 300 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 PYHIN1Q6K0P9 492 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 GET4Q7L5D6 327 aaPredicted RBP16.72■□□□□ 0.27
NUP54-205ENST00000507257 ESX1Q8N693 406 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 OTUB1Q96FW1 271 aaPredicted RBP16.72■□□□□ 0.27
NUP54-205ENST00000507257 ZSWIM3Q96MP5 696 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 TMED9Q9BVK6 235 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 PLA2G12AQ9BZM1 189 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 CLEC4MQ9H2X3 399 aaPredicted RBP16.72■□□□□ 0.27
NUP54-205ENST00000507257 OR51J1Q9H342 316 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 IMP3Q9NV31 184 aaKnown RBP16.72■□□□□ 0.27
NUP54-205ENST00000507257 UBQLN2Q9UHD9 624 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 KLF15Q9UIH9 416 aa16.72■□□□□ 0.27
NUP54-205ENST00000507257 LSM7Q9UK45 103 aaKnown RBP16.72■□□□□ 0.27
NUP54-205ENST00000507257 GTPBP1O00178 669 aaKnown RBP16.71■□□□□ 0.27
NUP54-205ENST00000507257 SLC28A2O43868 658 aa16.71■□□□□ 0.27
NUP54-205ENST00000507257 B4GALT2O60909 372 aa16.71■□□□□ 0.27
NUP54-205ENST00000507257 ABLIM3O94929 683 aa16.71■□□□□ 0.27
NUP54-205ENST00000507257 CD53P19397 219 aa16.71■□□□□ 0.27
NUP54-205ENST00000507257 CELP19835 753 aa16.71■□□□□ 0.27
NUP54-205ENST00000507257 PREPP48147 710 aa16.71■□□□□ 0.27
NUP54-205ENST00000507257 PITPNBP48739 271 aa16.71■□□□□ 0.27
NUP54-205ENST00000507257 CLCNKAP51800 687 aa16.71■□□□□ 0.27
NUP54-205ENST00000507257 CDH11P55287 796 aa16.71■□□□□ 0.27
NUP54-205ENST00000507257 NTRK2Q16620 822 aa16.71■□□□□ 0.27
NUP54-205ENST00000507257 ZNF658BQ4V348 819 aaPredicted RBP16.71■□□□□ 0.27
NUP54-205ENST00000507257 KCTD20Q7Z5Y7 419 aa16.71■□□□□ 0.27
NUP54-205ENST00000507257 TMEM150AQ86TG1 271 aa16.71■□□□□ 0.27
NUP54-205ENST00000507257 GPAT4Q86UL3 456 aa16.71■□□□□ 0.27
NUP54-205ENST00000507257 COMMD7Q86VX2 200 aa16.71■□□□□ 0.27
NUP54-205ENST00000507257 TIGD4Q8IY51 512 aa16.71■□□□□ 0.27
NUP54-205ENST00000507257 GJD3Q8N144 294 aa16.71■□□□□ 0.27
NUP54-205ENST00000507257 ZFP41Q8N8Y5 198 aa16.71■□□□□ 0.27
NUP54-205ENST00000507257 OR11H4Q8NGC9 324 aa16.71■□□□□ 0.27
NUP54-205ENST00000507257 BBS10Q8TAM1 723 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms