RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 SLC10A1Q14973 349 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 PDK1Q15118 436 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 MICAQ29983 383 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 PRR5LQ6MZQ0 368 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 RANBP3LQ86VV4 465 aaPredicted RBP3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 GPBP1Q86WP2 473 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 HSCBQ8IWL3 235 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 ZBED8Q8IZ13 594 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 SLC13A3Q8WWT9 602 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 DLX4Q92988 240 aaPredicted RBP3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 PPP1R16AQ96I34 528 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 NDUFAF3Q9BU61 184 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 ABCG8Q9H221 673 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 TIGARQ9NQ88 270 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 IMPAD1Q9NX62 359 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 PURGQ9UJV8 347 aaKnown RBP3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 TP53TG3Q9ULZ0 132 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 RNF115Q9Y4L5 304 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 FKBP7Q9Y680 259 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 MFSD2BA6NFX1 497 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 ARHGAP42A6NI28 874 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 PDLIM1O00151 329 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 BUB1O43683 1085 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 SDC3O75056 442 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 TSC22D2O75157 780 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 CCDC192P0DO97 292 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 GHRP10912 638 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 LAMP1P11279 417 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 PGAM2P15259 253 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 STMN1P16949 149 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 KLK2P20151 261 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 FASP25445 335 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 POU3F4P49335 361 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 ARHGDIBP52566 201 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 KRTAP10-3P60369 221 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 PPIAP62937 165 aaKnown RBP3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 SMC1AQ14683 1233 aaKnown RBP3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 CCDC40Q4G0X9 1142 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 RAB12Q6IQ22 244 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 TMEM26Q6ZUK4 368 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 TSEN54Q7Z6J9 526 aaKnown RBP3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 ZNF584Q8IVC4 421 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 CENPSQ8N2Z9 138 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 ARL10Q8N8L6 244 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 RFESDQ8TAC1 157 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 MRAPQ8TCY5 172 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 VN1R17PQ8TDU5 208 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 GTSF1Q8WW33 167 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 TMEM186Q96B77 213 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 DNAJA3Q96EY1 480 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 NSMCE2Q96MF7 247 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 TMEM237Q96Q45 408 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 CCT8L2Q96SF2 557 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 CNOT2Q9NZN8 540 aaKnown RBP3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 CLIP2Q9UDT6 1046 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 Q9UF83 564 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 CCPG1Q9ULG6 757 aa3.02□□□□□ -1.93
TOPBP1-204ENST00000505804 FAM168BA1KXE4 195 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 C11orf98E9PRG8 122 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 ALPPP05187 535 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 ALPIP09923 528 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 SLC35E2P0CK97 266 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 ALPPL2P10696 532 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 RFC2P35250 354 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 MAGEA4P43358 317 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 MAGEA9P43362 315 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 NOVP48745 357 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 FNTAP49354 379 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 NUMBP49757 651 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 MYBPC1Q00872 1141 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 ZIC1Q15915 447 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 ZSWIM7Q19AV6 140 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 RNF212Q495C1 297 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 IL23RQ5VWK5 629 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 CGB2Q6NT52 195 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 FAM159AQ6UWV7 190 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 PAMR1Q6UXH9 720 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 GCNT7Q6ZNI0 430 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 GOLGA7Q7Z5G4 137 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 UNC5CLQ8IV45 518 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 C11orf53Q8IXP5 236 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 WDR36Q8NI36 951 aaKnown RBP3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 SERAC1Q96JX3 654 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 C9orf85Q96MD7 179 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 TSPAN18Q96SJ8 248 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 FAM114A2Q9NRY5 505 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 TNFRSF19Q9NS68 423 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 SENP1Q9P0U3 644 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 MBD2Q9UBB5 411 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 SPASTQ9UBP0 616 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 FZR1Q9UM11 496 aa3.01□□□□□ -1.93
TOPBP1-204ENST00000505804 LRIT2A6NDA9 550 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 A8MX80 341 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 G3V3Y1 287 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 IMPA2O14732 288 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 TOXO94900 526 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 GJB5O95377 273 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 MT-ATP6P00846 226 aa3□□□□□ -1.93
TOPBP1-204ENST00000505804 GIG44P09565 113 aaPredicted RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms