RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 ADCY4Q8NFM4 1077 aa14.61□□□□□ -0.07
PDLIM7-213ENST00000505074 TRPC4APQ8TEL6 797 aa14.61□□□□□ -0.07
PDLIM7-213ENST00000505074 ZNF483Q8TF39 744 aaPredicted RBP14.61□□□□□ -0.07
PDLIM7-213ENST00000505074 SMPDL3BQ92485 455 aa14.61□□□□□ -0.07
PDLIM7-213ENST00000505074 ISL2Q96A47 359 aa14.61□□□□□ -0.07
PDLIM7-213ENST00000505074 ADIPOR1Q96A54 375 aa14.61□□□□□ -0.07
PDLIM7-213ENST00000505074 HSPBAP1Q96EW2 488 aa14.61□□□□□ -0.07
PDLIM7-213ENST00000505074 FAIM2Q9BWQ8 316 aa14.61□□□□□ -0.07
PDLIM7-213ENST00000505074 ITPAQ9BY32 194 aa14.61□□□□□ -0.07
PDLIM7-213ENST00000505074 ANGPTL4Q9BY76 406 aa14.61□□□□□ -0.07
PDLIM7-213ENST00000505074 NXF5Q9H1B4 397 aaKnown RBP14.61□□□□□ -0.07
PDLIM7-213ENST00000505074 EHD3Q9NZN3 535 aa14.61□□□□□ -0.07
PDLIM7-213ENST00000505074 KLRF1Q9NZS2 232 aa14.61□□□□□ -0.07
PDLIM7-213ENST00000505074 DMGDHQ9UI17 866 aaKnown RBP14.61□□□□□ -0.07
PDLIM7-213ENST00000505074 PSME2Q9UL46 239 aa14.61□□□□□ -0.07
PDLIM7-213ENST00000505074 DTX4Q9Y2E6 619 aa14.61□□□□□ -0.07
PDLIM7-213ENST00000505074 C15orf41Q9Y2V0 281 aa14.61□□□□□ -0.07
PDLIM7-213ENST00000505074 ZNF780BQ9Y6R6 833 aa14.61□□□□□ -0.07
PDLIM7-213ENST00000505074 EXOC1LA0A1B0GW35 172 aa14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 TRIM64A6NGJ6 449 aa14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 TRIM64BA6NI03 449 aa14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 PPP6CO00743 305 aa14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 OR4F21O95013 312 aa14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 SNRPAP09012 282 aaKnown RBP14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 CSNK2A2P19784 350 aaPredicted RBP14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 TAC1P20366 129 aa14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 GCKP35557 465 aa14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 CASP3P42574 277 aa14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 CDK9P50750 372 aaKnown RBP14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 ZNF136P52737 540 aa14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 CRYZQ08257 329 aaKnown RBP14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 SF3B4Q15427 424 aaKnown RBP eCLIP14.6□□□□□ -0.072e-7■■■■□ 19.3
PDLIM7-213ENST00000505074 EIPR1Q53HC9 387 aa14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 WIPI1Q5MNZ9 446 aaPredicted RBP14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 FAM219BQ5XKK7 198 aa14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 FAM180BQ6P0A1 224 aa14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 ANGPTL8Q6UXH0 198 aa14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 MMGT1Q8N4V1 131 aa14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 C1orf52Q8N6N3 182 aaKnown RBP14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 NOA1Q8NC60 698 aaKnown RBP14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 MNS1Q8NEH6 495 aa14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 OR1J4Q8NGS1 313 aa14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 DCAKDQ8WVC6 231 aa14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 OMA1Q96E52 524 aa14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 DACH2Q96NX9 599 aa14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 TRIB1Q96RU8 372 aa14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 TIMP4Q99727 224 aa14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 FUT8Q9BYC5 575 aa14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 EPB41L4BQ9H329 900 aa14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 BRF2Q9HAW0 419 aa14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 MAT2BQ9NZL9 334 aa14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 ZNF180Q9UJW8 692 aa14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 EIF3LQ9Y262 564 aaKnown RBP14.6□□□□□ -0.07
PDLIM7-213ENST00000505074 NBEAL1Q6ZS30 2694 aa14.59□□□□□ -0.07
PDLIM7-213ENST00000505074 KDM4EB2RXH2 506 aaPredicted RBP14.59□□□□□ -0.07
PDLIM7-213ENST00000505074 EEF1E1-BLOC1S5C9J1V9 151 aa14.59□□□□□ -0.07
PDLIM7-213ENST00000505074 CASKO14936 926 aa14.59□□□□□ -0.07
PDLIM7-213ENST00000505074 EEF1E1O43324 174 aaKnown RBP14.59□□□□□ -0.07
PDLIM7-213ENST00000505074 PPM1BO75688 479 aa14.59□□□□□ -0.07
PDLIM7-213ENST00000505074 SUPT7LO94864 414 aa14.59□□□□□ -0.07
PDLIM7-213ENST00000505074 HPNP05981 417 aa14.59□□□□□ -0.07
PDLIM7-213ENST00000505074 HMOX2P30519 316 aa14.59□□□□□ -0.07
PDLIM7-213ENST00000505074 GALNT1Q10472 559 aaPredicted RBP14.59□□□□□ -0.07
PDLIM7-213ENST00000505074 LTB4RQ15722 352 aa14.59□□□□□ -0.07
PDLIM7-213ENST00000505074 PRICKLE4Q2TBC4 344 aa14.59□□□□□ -0.07
PDLIM7-213ENST00000505074 LGSNQ5TDP6 509 aa14.59□□□□□ -0.07
PDLIM7-213ENST00000505074 CDYL2Q8N8U2 506 aa14.59□□□□□ -0.07
PDLIM7-213ENST00000505074 C17orf47Q8NEP4 570 aa14.59□□□□□ -0.07
PDLIM7-213ENST00000505074 OR52R1Q8NGF1 315 aa14.59□□□□□ -0.07
PDLIM7-213ENST00000505074 TMEM41AQ96HV5 264 aa14.59□□□□□ -0.07
PDLIM7-213ENST00000505074 LCORQ96JN0 433 aaPredicted RBP14.59□□□□□ -0.07
PDLIM7-213ENST00000505074 OSBPL11Q9BXB4 747 aa14.59□□□□□ -0.07
PDLIM7-213ENST00000505074 MAPRE3Q9UPY8 281 aa14.59□□□□□ -0.07
PDLIM7-213ENST00000505074 PLLPQ9Y342 182 aa14.59□□□□□ -0.07
PDLIM7-213ENST00000505074 ZANQ9Y493 2812 aa14.59□□□□□ -0.07
PDLIM7-213ENST00000505074 C2orf72A6NCS6 295 aa14.58□□□□□ -0.08
PDLIM7-213ENST00000505074 CDH16O75309 829 aa14.58□□□□□ -0.08
PDLIM7-213ENST00000505074 KRT6AP02538 564 aa14.58□□□□□ -0.08
PDLIM7-213ENST00000505074 KRT6BP04259 564 aa14.58□□□□□ -0.08
PDLIM7-213ENST00000505074 ATP1B1P05026 303 aa14.58□□□□□ -0.08
PDLIM7-213ENST00000505074 ABCB1P08183 1280 aaPredicted RBP14.58□□□□□ -0.08
PDLIM7-213ENST00000505074 CTAGE8P0CG41 777 aa14.58□□□□□ -0.08
PDLIM7-213ENST00000505074 KRT6CP48668 564 aa14.58□□□□□ -0.08
PDLIM7-213ENST00000505074 MRPS35P82673 323 aaKnown RBP14.58□□□□□ -0.08
PDLIM7-213ENST00000505074 CLCQ05315 142 aa14.58□□□□□ -0.08
PDLIM7-213ENST00000505074 MAP4K2Q12851 820 aa14.58□□□□□ -0.08
PDLIM7-213ENST00000505074 RCAN2Q14206 197 aa14.58□□□□□ -0.08
PDLIM7-213ENST00000505074 RASA2Q15283 850 aa14.58□□□□□ -0.08
PDLIM7-213ENST00000505074 TCHHL1Q5QJ38 904 aaPredicted RBP14.58□□□□□ -0.08
PDLIM7-213ENST00000505074 TIGD3Q6B0B8 471 aa14.58□□□□□ -0.08
PDLIM7-213ENST00000505074 DESI1Q6ICB0 168 aa14.58□□□□□ -0.08
PDLIM7-213ENST00000505074 HMBOX1Q6NT76 420 aa14.58□□□□□ -0.08
PDLIM7-213ENST00000505074 YRDCQ86U90 279 aaKnown RBP14.58□□□□□ -0.08
PDLIM7-213ENST00000505074 CTAGE4Q8IX94 777 aa14.58□□□□□ -0.08
PDLIM7-213ENST00000505074 RDH11Q8TC12 318 aa14.58□□□□□ -0.08
PDLIM7-213ENST00000505074 ABTB1Q969K4 478 aaPredicted RBP14.58□□□□□ -0.08
PDLIM7-213ENST00000505074 TM4SF18Q96CE8 201 aa14.58□□□□□ -0.08
PDLIM7-213ENST00000505074 PERPQ96FX8 193 aa14.58□□□□□ -0.08
PDLIM7-213ENST00000505074 DOCK7Q96N67 2140 aa14.58□□□□□ -0.08
PDLIM7-213ENST00000505074 UGT2B28Q9BY64 529 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms