RNA–Protein interactions for RNA: ENST00000504959.5

SNX25-203, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 1,868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-203ENST00000504959 PRICKLE4Q2TBC4 344 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 NRN1LQ496H8 165 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 TMEM52BQ4KMG9 183 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 CCNYL2Q5T2Q4 361 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 GPR107Q5VW38 600 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 CES5AQ6NT32 575 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 TMEM26Q6ZUK4 368 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 USP51Q70EK9 711 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 HORMAD1Q86X24 394 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 HIPK1Q86Z02 1210 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 ZDHHC21Q8IVQ6 265 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 CLECL1Q8IZS7 167 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 C8orf59Q8N0T1 100 aaPredicted RBP5.36□□□□□ -1.55
SNX25-203ENST00000504959 OR4A15Q8NGL6 344 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 OR10Q1Q8NGQ4 319 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 OR2L2Q8NH16 312 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 PNPT1Q8TCS8 783 aaKnown RBP5.36□□□□□ -1.55
SNX25-203ENST00000504959 SLC5A11Q8WWX8 675 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 FGF13Q92913 245 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 UBE2E3Q969T4 207 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 RAB7BQ96AH8 199 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 SH3KBP1Q96B97 665 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 CNDP2Q96KP4 475 aaKnown RBP5.36□□□□□ -1.55
SNX25-203ENST00000504959 FCRL1Q96LA6 429 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 RDH12Q96NR8 316 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 MUS81Q96NY9 551 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 HIST1H2AAQ96QV6 131 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 NUDT22Q9BRQ3 303 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 FUZQ9BT04 418 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 DCUN1D5Q9BTE7 237 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 ADNPQ9H2P0 1102 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 TOR3AQ9H497 397 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 DPEP2Q9H4A9 486 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 POLR1BQ9H9Y6 1135 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 GCM1Q9NP62 436 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 ATAD3AQ9NVI7 634 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 GDE1Q9NZC3 331 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 VPS4AQ9UN37 437 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 ASF1AQ9Y294 204 aa5.36□□□□□ -1.55
SNX25-203ENST00000504959 TDRKHQ9Y2W6 561 aaKnown RBP5.36□□□□□ -1.55
SNX25-203ENST00000504959 DOCK9Q9BZ29 2069 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 PIPSLA2A3N6 862 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 OTOL1A6NHN0 477 aaPredicted RBP5.35□□□□□ -1.55
SNX25-203ENST00000504959 GABRR3A8MPY1 467 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 UPK1AO00322 258 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 FOXE1O00358 373 aaPredicted RBP5.35□□□□□ -1.55
SNX25-203ENST00000504959 SAP18O00422 153 aaKnown RBP5.35□□□□□ -1.55
SNX25-203ENST00000504959 PEX12O00623 359 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 FOXD2O60548 495 aaPredicted RBP5.35□□□□□ -1.55
SNX25-203ENST00000504959 NOL3O60936 208 aaKnown RBP5.35□□□□□ -1.55
SNX25-203ENST00000504959 ETHE1O95571 254 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 SCGB1D1O95968 90 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 RPN2P04844 631 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 FABP3P05413 133 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 INHBBP09529 407 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 PEPDP12955 493 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 EFNA1P20827 205 aaPredicted RBP5.35□□□□□ -1.55
SNX25-203ENST00000504959 KELP23276 732 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 PTPN6P29350 595 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 TIA1P31483 386 aaKnown RBP eCLIP5.35□□□□□ -1.55
SNX25-203ENST00000504959 RPL3P39023 403 aaKnown RBP5.35□□□□□ -1.55
SNX25-203ENST00000504959 RGS19P49795 217 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 GZMMP51124 257 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 IST1P53990 364 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 RAD23AP54725 363 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 FAM3BP58499 235 aaPredicted RBP5.35□□□□□ -1.55
SNX25-203ENST00000504959 C21orf58P58505 322 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 IL1RL1Q01638 556 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 MC2RQ01718 297 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 ZNF763Q0D2J5 394 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 GRSF1Q12849 480 aaKnown RBP eCLIP5.35□□□□□ -1.55
SNX25-203ENST00000504959 CNTN1Q12860 1018 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 PPP1R8Q12972 351 aaKnown RBP5.35□□□□□ -1.55
SNX25-203ENST00000504959 RUNX3Q13761 415 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 VMACQ2NL98 169 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 ZNF829Q3KNS6 432 aaPredicted RBP5.35□□□□□ -1.55
SNX25-203ENST00000504959 ANKDD1AQ495B1 522 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 ADNP2Q6IQ32 1131 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 UNC5DQ6UXZ4 953 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 KCTD8Q6ZWB6 473 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 TRIM73Q86UV7 250 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 AMZ2Q86W34 360 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 CACUL1Q86Y37 369 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 ARL10Q8N8L6 244 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 SUN3Q8TAQ9 357 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 SETD7Q8WTS6 366 aaKnown RBP5.35□□□□□ -1.55
SNX25-203ENST00000504959 BORCS5Q969J3 196 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 RAD51AP1Q96B01 352 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 CXorf40BQ96DE9 158 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 ZDHHC12Q96GR4 267 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 TPD52L3Q96J77 140 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 RADILQ96JH8 1075 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 LINC00615Q96LM1 132 aaPredicted RBP5.35□□□□□ -1.55
SNX25-203ENST00000504959 DIRC2Q96SL1 478 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 TUBA1CQ9BQE3 449 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 OSBPL10Q9BXB5 764 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 TMEM245Q9H330 911 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 TPT1P8Q9HAU6 139 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 ZDHHC4Q9NPG8 344 aa5.35□□□□□ -1.55
SNX25-203ENST00000504959 LIN7CQ9NUP9 197 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms