RNA–Protein interactions for RNA: ENST00000504813.5

CNBP-208, Transcript of CCHC-type zinc finger nucleic acid binding protein, human

APPRIS ALT1 TSL 2 BASIC

Gene CNBP, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNBP-208	ENST00000504813	IL6	P05231	212 aa		13.63	□□□□□ -0.23
CNBP-208	ENST00000504813	NR2F6	P10588	404 aa		13.63	□□□□□ -0.23
CNBP-208	ENST00000504813	COX7A2	P14406	83 aa		13.63	□□□□□ -0.23
CNBP-208	ENST00000504813	CAPN3	P20807	821 aa		13.63	□□□□□ -0.23
CNBP-208	ENST00000504813	ASMT	P46597	345 aa		13.63	□□□□□ -0.23
CNBP-208	ENST00000504813	PER3	P56645	1201 aa		13.63	□□□□□ -0.23
CNBP-208	ENST00000504813	CLDN8	P56748	225 aa		13.63	□□□□□ -0.23
CNBP-208	ENST00000504813	ELF3	P78545	371 aa	Predicted RBP	13.63	□□□□□ -0.23
CNBP-208	ENST00000504813	PLIN5	Q00G26	463 aa		13.63	□□□□□ -0.23
CNBP-208	ENST00000504813	TIGD2	Q4W5G0	525 aa		13.63	□□□□□ -0.23
CNBP-208	ENST00000504813	BNC2	Q6ZN30	1099 aa	Predicted RBP	13.63	□□□□□ -0.23
CNBP-208	ENST00000504813	MAMDC2	Q7Z304	686 aa	Predicted RBP	13.63	□□□□□ -0.23
CNBP-208	ENST00000504813	GPALPP1	Q8IXQ4	340 aa		13.63	□□□□□ -0.23
CNBP-208	ENST00000504813	ULK2	Q8IYT8	1036 aa		13.63	□□□□□ -0.23
CNBP-208	ENST00000504813	METTL4	Q8N3J2	472 aa		13.63	□□□□□ -0.23
CNBP-208	ENST00000504813	CHTF18	Q8WVB6	975 aa		13.63	□□□□□ -0.23
CNBP-208	ENST00000504813	UTP4	Q969X6	686 aa	Known RBP	13.63	□□□□□ -0.23
CNBP-208	ENST00000504813	FCRL1	Q96LA6	429 aa		13.63	□□□□□ -0.23
CNBP-208	ENST00000504813	TEX37	Q96LM6	180 aa		13.63	□□□□□ -0.23
CNBP-208	ENST00000504813	EBPL	Q9BY08	206 aa		13.63	□□□□□ -0.23
CNBP-208	ENST00000504813	TEX10	Q9NXF1	929 aa	Predicted RBP	13.63	□□□□□ -0.23
CNBP-208	ENST00000504813	COPS7A	Q9UBW8	275 aa		13.63	□□□□□ -0.23
CNBP-208	ENST00000504813	BAIAP2L1	Q9UHR4	511 aa		13.63	□□□□□ -0.23
CNBP-208	ENST00000504813	ADAM29	Q9UKF5	820 aa		13.63	□□□□□ -0.23
CNBP-208	ENST00000504813	DLGAP4	Q9Y2H0	992 aa		13.63	□□□□□ -0.23
CNBP-208	ENST00000504813	GNG14	A0A1W2PPG7	69 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813		A8MVJ9	347 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	NPIPA5	E9PKD4	350 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	KLRC4-KLRK1	H3BQV0	150 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	ANKRD28	O15084	1053 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	PGRMC2	O15173	223 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	ASNA1	O43681	348 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	ZG16	O60844	167 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	OR6B1	O95007	311 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	KLK1	P06870	262 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	ANXA4	P09525	319 aa	Predicted RBP	13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	SDC1	P18827	310 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	PRPS1L1	P21108	318 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	TIA1	P31483	386 aa	Known RBP eCLIP	13.62	□□□□□ -0.23	6e-25	■■■■□ 26.1
CNBP-208	ENST00000504813	SOX3	P41225	446 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	CA7	P43166	264 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	MEOX1	P50221	254 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	PSME3	P61289	254 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	RBPJ	Q06330	500 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	13.62	□□□□□ -0.23	9e-10	■■■■■ 42.2
CNBP-208	ENST00000504813	IL20RB	Q6UXL0	311 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	C9orf40	Q8IXQ3	194 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	POGLUT1	Q8NBL1	392 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	CLHC1	Q8NHS4	586 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	C16orf52	Q8NHV5	167 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	ASB15	Q8WXK1	588 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	VPS33A	Q96AX1	596 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	FBXL20	Q96IG2	436 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	TSSK3	Q96PN8	268 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	HOPX	Q9BPY8	73 aa	Predicted RBP	13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	HPF1	Q9NWY4	346 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	SIRT5	Q9NXA8	310 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	NPIPA1	Q9UND3	350 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	ZNF835	Q9Y2P0	537 aa		13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	NCOA6	Q14686	2063 aa	Predicted RBP	13.62	□□□□□ -0.23
CNBP-208	ENST00000504813	EXPH5	Q8NEV8	1989 aa		13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	TRGV8	A0A0C4DH27	118 aa		13.61	□□□□□ -0.23
CNBP-208	ENST00000504813		A0A1W2PS29	197 aa		13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	PEX1	O43933	1283 aa		13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	PCDH7	O60245	1069 aa		13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	SLC19A2	O60779	497 aa		13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	ZNF24	P17028	368 aa		13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	IL12A	P29459	219 aa		13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	GALNS	P34059	522 aa		13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	NFYC	Q13952	458 aa		13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	MPEG1	Q2M385	716 aa		13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	OR52E8	Q6IFG1	317 aa		13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	GALNT18	Q6P9A2	607 aa		13.61	□□□□□ -0.23
CNBP-208	ENST00000504813		Q6ZPB1	254 aa	Predicted RBP	13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	PAGE2	Q7Z2X7	111 aa		13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	CHERP	Q8IWX8	916 aa	Known RBP	13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	C10orf67	Q8IYJ2	551 aa		13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	ZFP62	Q8NB50	900 aa	Predicted RBP	13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	PSD4	Q8NDX1	1056 aa		13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	FAM13C	Q8NE31	585 aa		13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	OR5L2	Q8NGL0	311 aa		13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	CDC26	Q8NHZ8	85 aa		13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	NUBPL	Q8TB37	319 aa		13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	ART5	Q96L15	291 aa		13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	CDRT15	Q96T59	188 aa		13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	PELO	Q9BRX2	385 aa	Known RBP	13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	TIMMDC1	Q9NPL8	285 aa		13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	DEPP	Q9NTK1	212 aa		13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	ADA2	Q9NZK5	511 aa		13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	ERVK-11	Q9UQG0	969 aa		13.61	□□□□□ -0.23
CNBP-208	ENST00000504813	ARHGAP10	A1A4S6	786 aa		13.6	□□□□□ -0.23
CNBP-208	ENST00000504813	DYRK3	O43781	588 aa		13.6	□□□□□ -0.23
CNBP-208	ENST00000504813	NPPA	P01160	153 aa		13.6	□□□□□ -0.23
CNBP-208	ENST00000504813	SLC35E2	P0CK97	266 aa		13.6	□□□□□ -0.23
CNBP-208	ENST00000504813	S100A3	P33764	101 aa		13.6	□□□□□ -0.23
CNBP-208	ENST00000504813	HPCAL1	P37235	193 aa		13.6	□□□□□ -0.23
CNBP-208	ENST00000504813	GPR85	P60893	370 aa		13.6	□□□□□ -0.23
CNBP-208	ENST00000504813	DPY19L1	Q2PZI1	675 aa		13.6	□□□□□ -0.23
CNBP-208	ENST00000504813	FAM174B	Q3ZCQ3	159 aa		13.6	□□□□□ -0.23

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