RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 GIMD1P0DJR0 217 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 CBSLP0DN79 551 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 ITGA3P26006 1051 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 CBSP35520 551 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 UGT2B10P36537 528 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 SLC6A8P48029 635 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 FHITP49789 147 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 NUP107P57740 925 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 PSMC5P62195 406 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 TSC22D1Q15714 1073 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 POM121L1PQ3SYA9 428 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 WASHC2DQ5SRD0 308 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 C20orf194Q5TEA3 1177 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 TTC33Q6PID6 262 aaPredicted RBP4.79□□□□□ -1.64
NIPBL-204ENST00000504430 ADGRG3Q86Y34 549 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 NUDCD3Q8IVD9 361 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 TMEM132CQ8N3T6 1108 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 TXNDC5Q8NBS9 432 aaKnown RBP4.79□□□□□ -1.64
NIPBL-204ENST00000504430 NUBPLQ8TB37 319 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 SLC38A4Q969I6 547 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 C10orf35Q96D05 121 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 RAB39BQ96DA2 213 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 GLT1D1Q96MS3 346 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 RIT2Q99578 217 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 SYT11Q9BT88 431 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 WACQ9BTA9 647 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 MED10Q9BTT4 135 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 DYRK4Q9NR20 520 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 GPR173Q9NS66 373 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 CYSLTR2Q9NS75 346 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 NPAP1Q9NZP6 1156 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 LRWD1Q9UFC0 647 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 LNPEPQ9UIQ6 1025 aa4.79□□□□□ -1.64
NIPBL-204ENST00000504430 SMARCA2P51531 1590 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 CLEC18AA5D8T8 446 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 DDNO94850 711 aaPredicted RBP4.78□□□□□ -1.64
NIPBL-204ENST00000504430 ARHGEF15O94989 841 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 KIR3DL2P43630 455 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 CSNK1A1P48729 337 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 USF2Q15853 346 aaPredicted RBP4.78□□□□□ -1.64
NIPBL-204ENST00000504430 GABRA6Q16445 453 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 KCTD19Q17RG1 926 aaPredicted RBP4.78□□□□□ -1.64
NIPBL-204ENST00000504430 RGS21Q2M5E4 152 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 PRR27Q6MZM9 219 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 CLEC18BQ6UXF7 455 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 GPRIN3Q6ZVF9 776 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 ZBED8Q8IZ13 594 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 CLEC18CQ8NCF0 446 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 CPEB3Q8NE35 698 aaKnown RBP4.78□□□□□ -1.64
NIPBL-204ENST00000504430 MDGA1Q8NFP4 955 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 GATA5Q9BWX5 397 aaPredicted RBP4.78□□□□□ -1.64
NIPBL-204ENST00000504430 TM6SF1Q9BZW5 370 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 CIPCQ9C0C6 399 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 ZDHHC6Q9H6R6 413 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 VIPAS39Q9H9C1 493 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 FLRT1Q9NZU1 646 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 TXNDC16Q9P2K2 825 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 MYEF2Q9P2K5 600 aaKnown RBP4.78□□□□□ -1.64
NIPBL-204ENST00000504430 NXT1Q9UKK6 140 aaKnown RBP4.78□□□□□ -1.64
NIPBL-204ENST00000504430 OAZ3Q9UMX2 235 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 TBL2Q9Y4P3 447 aaKnown RBP4.78□□□□□ -1.64
NIPBL-204ENST00000504430 MRPS18BQ9Y676 258 aaKnown RBP4.78□□□□□ -1.64
NIPBL-204ENST00000504430 ATP10DQ9P241 1426 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 A8MU76 341 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 RFXANKO14593 260 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 MOCS2O96007 188 aaPredicted RBP4.78□□□□□ -1.64
NIPBL-204ENST00000504430 ACTL6AO96019 429 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 IFNA14P01570 189 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 HLA-DQA2P01906 255 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 FABP1P07148 127 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 TACR3P29371 465 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 YWHAGP61981 247 aaKnown RBP eCLIP4.78□□□□□ -1.64
NIPBL-204ENST00000504430 DLX2Q07687 328 aaPredicted RBP4.78□□□□□ -1.64
NIPBL-204ENST00000504430 SPOPLQ6IQ16 392 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 METTL2BQ6P1Q9 378 aaKnown RBP4.78□□□□□ -1.64
NIPBL-204ENST00000504430 METTL7BQ6UX53 244 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 DCDC5Q6ZRR9 648 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 PID1Q7Z2X4 250 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 BEST3Q8N1M1 668 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 ARRDC2Q8TBH0 407 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 ZNF333Q96JL9 665 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 NAPGQ99747 312 aaPredicted RBP4.78□□□□□ -1.64
NIPBL-204ENST00000504430 TM2D2Q9BX73 214 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 NAA50Q9GZZ1 169 aaKnown RBP4.78□□□□□ -1.64
NIPBL-204ENST00000504430 TPSG1Q9NRR2 321 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 DUSP22Q9NRW4 184 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 INIPQ9NRY2 104 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 PRPF19Q9UMS4 504 aaKnown RBP4.78□□□□□ -1.64
NIPBL-204ENST00000504430 NPTNQ9Y639 398 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 MAP3K15Q6ZN16 1313 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 F8VVB4 439 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 F8VWA3 439 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 CHMP2AO43633 222 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 PGK1P00558 417 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 IL6P05231 212 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 GP1BAP07359 652 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 ACP2P11117 423 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 PMCHP20382 165 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 OR1E1P30953 314 aa4.78□□□□□ -1.64
NIPBL-204ENST00000504430 RABGGTBP53611 331 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms