RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 MEGF10Q96KG7 1140 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 C10orf90Q96M02 699 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 CCDC115Q96NT0 180 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 S100A13Q99584 98 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 WDR83Q9BRX9 315 aaKnown RBP3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 MED18Q9BUE0 208 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 DUSP16Q9BY84 665 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 DERL2Q9GZP9 239 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 XKR8Q9H6D3 395 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 DDX31Q9H8H2 851 aaKnown RBP3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 RNF122Q9H9V4 155 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 SGK2Q9HBY8 427 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 MED9Q9NWA0 146 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 PGPEP1Q9NXJ5 209 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 CXXC1Q9P0U4 656 aaPredicted RBP3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 CYTH4Q9UIA0 394 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 MAGEL2Q9UJ55 1249 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 HSPB11Q9Y547 144 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 RBM7Q9Y580 266 aaKnown RBP3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 NPFFR2Q9Y5X5 522 aa3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 NYNRINQ9P2P1 1898 aaKnown RBP3.49□□□□□ -1.85
PCDH11X-208ENST00000504220 VSTM5A8MXK1 200 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF879B4DU55 563 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 STX16O14662 325 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 OR10H2O60403 315 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 DLX3O60479 287 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 CILPO75339 1184 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF432O94892 652 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 PTTG1O95997 202 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 GLUD1P00367 558 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 OR8U8P0C7N1 319 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF806P0C7X5 589 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 SPP1P10451 314 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 MYF6P23409 242 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 F8A1P23610 371 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 MYL9P24844 172 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 PTPN3P26045 913 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 PSMB6P28072 239 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 ELK4P28324 431 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 MAT2AP31153 395 aaKnown RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 APOBEC3AP31941 199 aaPredicted RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC1A2P43004 574 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 CTSOP43234 321 aaPredicted RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 RABIFP47224 123 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 HK3P52790 923 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 ACLYP53396 1101 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 MAZP56270 477 aaKnown RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 OR2B6P58173 313 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 TAS2R41P59536 307 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 TRA2BP62995 288 aaKnown RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 ATXN7L3Q14CW9 347 aaPredicted RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 TAF13Q15543 124 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 CCNYL2Q5T2Q4 361 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 OTUD1Q5VV17 481 aaPredicted RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 PYHIN1Q6K0P9 492 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 C3orf33Q6P1S2 294 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 LCLAT1Q6UWP7 414 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 SERPINA13PQ6UXR4 307 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF730Q6ZMV8 503 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 ISCA2Q86U28 154 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 UNC93AQ86WB7 457 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 SCML4Q8N228 414 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 SMG8Q8ND04 991 aaKnown RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC24A4Q8NFF2 622 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 NLGN4YQ8NFZ3 816 aaPredicted RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 OR4C15Q8NGM1 316 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 PCNPQ8WW12 178 aaKnown RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 KLK6Q92876 244 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 SCLYQ96I15 445 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC38A2Q96QD8 506 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 MAPKAP1Q9BPZ7 522 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 CMSS1Q9BQ75 279 aaKnown RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 DCSTAMPQ9H295 470 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 SMOC1Q9H4F8 434 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 TMEM134Q9H6X4 195 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 AKTIPQ9H8T0 292 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 INTS10Q9NVR2 710 aaKnown RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 C14orf119Q9NWQ9 140 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 RHCGQ9UBD6 479 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 APOBEC3BQ9UH17 382 aaKnown RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 ACSL5Q9ULC5 683 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 FCF1Q9Y324 198 aaKnown RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 ARL5AQ9Y689 179 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 ISPDA4D126 451 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 C2CD4BA6NLJ0 364 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 RFPL4AA6NLU0 287 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 RFPL4AL1F8VTS6 287 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 SMLR1H3BR10 107 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 H7C4K7 107 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 CXCR6O00574 342 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 ITGB1BP1O14713 200 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 TNFRSF13BO14836 293 aaPredicted RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 TO15178 435 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 HPGDSO60760 199 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 ICOSLGO75144 302 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 CA11O75493 328 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 AP2A1O95782 977 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 SMIM10L2AP0DMW4 78 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 SMIM10L2BP0DMW5 78 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 ACRP10323 421 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms