RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 SIK2Q9H0K1 926 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 OR52A5Q9H2C5 316 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 ZDHHC4Q9NPG8 344 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 SLC2A8Q9NY64 477 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 TMEM216Q9P0N5 145 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 TP53TG5Q9Y2B4 290 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 FIS1Q9Y3D6 152 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 A0A1B0GTW7 788 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 A0A1W2PN81 502 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 H7BY64 318 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 J3QW42 95 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 PRKRAO75569 313 aaKnown RBP5.95□□□□□ -1.46
CLCN3-204ENST00000504131 ZNF432O94892 652 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 ABHD16AO95870 558 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 OR8U9P0C7N5 309 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 CHRNA7P36544 502 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 INPP5JQ15735 1006 aaPredicted RBP5.95□□□□□ -1.46
CLCN3-204ENST00000504131 NAB2Q15742 525 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 ANGEL2Q5VTE6 544 aaKnown RBP5.95□□□□□ -1.46
CLCN3-204ENST00000504131 BTLAQ7Z6A9 289 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 VWA5B2Q8N398 1253 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 HORMAD2Q8N7B1 307 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 BEND7Q8N7W2 519 aaPredicted RBP5.95□□□□□ -1.46
CLCN3-204ENST00000504131 PROKR2Q8NFJ6 384 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 OR13D1Q8NGV5 346 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 OR8D1Q8WZ84 308 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 ERGIC1Q969X5 290 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 COL25A1Q9BXS0 654 aaPredicted RBP5.95□□□□□ -1.46
CLCN3-204ENST00000504131 MINPP1Q9UNW1 487 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 INMT-MINDY4F8WBC2 141 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 ARNTLO00327 626 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 TOXO94900 526 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 GSTM3P21266 225 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 MC4RP32245 332 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 CASRP41180 1078 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 ASPAP45381 313 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 GPM6BQ13491 265 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 TRA2AQ13595 282 aaKnown RBP eCLIP5.95□□□□□ -1.46
CLCN3-204ENST00000504131 AUHQ13825 339 aaKnown RBP5.95□□□□□ -1.46
CLCN3-204ENST00000504131 ZNF684Q5T5D7 378 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 ZNF562Q6V9R5 426 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 TRIM46Q7Z4K8 759 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 GABRG1Q8N1C3 465 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 MUC15Q8N387 334 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 Q8N402 240 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 HSD17B11Q8NBQ5 300 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 TXNDC5Q8NBS9 432 aaKnown RBP5.95□□□□□ -1.46
CLCN3-204ENST00000504131 ST6GALNAC3Q8NDV1 305 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 ZFP90Q8TF47 636 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 TMEM169Q96HH4 297 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 C3orf30Q96M34 536 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 NAA11Q9BSU3 229 aaPredicted RBP5.95□□□□□ -1.46
CLCN3-204ENST00000504131 URM1Q9BTM9 101 aaKnown RBP5.95□□□□□ -1.46
CLCN3-204ENST00000504131 GSX2Q9BZM3 304 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 LRRC4Q9HBW1 653 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 ERRFI1Q9UJM3 462 aaPredicted RBP5.95□□□□□ -1.46
CLCN3-204ENST00000504131 RHBDD3Q9Y3P4 386 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 RPTORQ8N122 1335 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 PALLDQ8WX93 1383 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 A0A1B0GTH6 734 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 YBX3P16989 372 aaKnown RBP eCLIP5.95□□□□□ -1.46
CLCN3-204ENST00000504131 ACO1P21399 889 aaKnown RBP5.95□□□□□ -1.46
CLCN3-204ENST00000504131 ICAM3P32942 547 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 GMPRP36959 345 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 AGFG1P52594 562 aaKnown RBP5.95□□□□□ -1.46
CLCN3-204ENST00000504131 SLC16A1P53985 500 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 SORDQ00796 357 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 FAAP100Q0VG06 881 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 GTF2H2Q13888 395 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 GTF2H3Q13889 308 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 WBP2NLQ6ICG8 309 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 GTF2H2CQ6P1K8 395 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 ASCL4Q6XD76 172 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 CCDC190Q86UF4 302 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 RTN4RL2Q86UN3 420 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 LINC00346Q8IVM7 164 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 ENGASEQ8NFI3 743 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 RHEBL1Q8TAI7 183 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 C9orf43Q8TAL5 461 aaPredicted RBP5.95□□□□□ -1.46
CLCN3-204ENST00000504131 BIRC7Q96CA5 298 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 ARHGDIGQ99819 225 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 ARL6Q9H0F7 186 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 MMP28Q9H239 520 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 DCSTAMPQ9H295 470 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 TLR9Q9NR96 1032 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 CNTNAP2Q9UHC6 1331 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 MOKQ9UQ07 419 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 ZNF541Q9H0D2 1346 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 A0A0G2JLW4 131 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 F5H5T6 163 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 EDF1O60869 148 aaKnown RBP5.95□□□□□ -1.46
CLCN3-204ENST00000504131 RHOCP08134 193 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 KDELR1P24390 212 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 AGTR1P30556 359 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 SHMT2P34897 504 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 SOX10P56693 466 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 ST3GAL4Q11206 333 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 EXT1Q16394 746 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 SMIM21Q3B7S5 101 aa5.95□□□□□ -1.46
CLCN3-204ENST00000504131 NAPEPLDQ6IQ20 393 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms