RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 CORO7P57737 925 aa23.14■■□□□ 1.3
LSM6-202ENST00000502781 PSPHP78330 225 aa23.14■■□□□ 1.3
LSM6-202ENST00000502781 NNATQ16517 81 aa23.14■■□□□ 1.3
LSM6-202ENST00000502781 PRR30Q53SZ7 412 aaPredicted RBP23.14■■□□□ 1.3
LSM6-202ENST00000502781 EXOSC6Q5RKV6 272 aaKnown RBP23.14■■□□□ 1.3
LSM6-202ENST00000502781 PRICKLE2Q7Z3G6 844 aa23.14■■□□□ 1.3
LSM6-202ENST00000502781 GALNTL5Q7Z4T8 443 aa23.14■■□□□ 1.3
LSM6-202ENST00000502781 CLECL1Q8IZS7 167 aa23.14■■□□□ 1.3
LSM6-202ENST00000502781 MIER2Q8N344 545 aa23.14■■□□□ 1.3
LSM6-202ENST00000502781 PSD4Q8NDX1 1056 aa23.14■■□□□ 1.3
LSM6-202ENST00000502781 TAAR6Q96RI8 345 aa23.14■■□□□ 1.3
LSM6-202ENST00000502781 LMF2Q9BU23 707 aaKnown RBP23.14■■□□□ 1.3
LSM6-202ENST00000502781 TIMMDC1Q9NPL8 285 aa23.14■■□□□ 1.3
LSM6-202ENST00000502781 KLHL1Q9NR64 748 aa23.14■■□□□ 1.3
LSM6-202ENST00000502781 FAM120CQ9NX05 1096 aaKnown RBP23.14■■□□□ 1.3
LSM6-202ENST00000502781 NTNG1Q9Y2I2 539 aa23.14■■□□□ 1.3
LSM6-202ENST00000502781 C9JVG2 144 aa23.14■■□□□ 1.29
LSM6-202ENST00000502781 PGRP06401 933 aa23.14■■□□□ 1.29
LSM6-202ENST00000502781 S100A3P33764 101 aa23.14■■□□□ 1.29
LSM6-202ENST00000502781 IRX1P78414 480 aaPredicted RBP23.14■■□□□ 1.29
LSM6-202ENST00000502781 CISD2Q8N5K1 135 aaKnown RBP23.14■■□□□ 1.29
LSM6-202ENST00000502781 VPS37AQ8NEZ2 397 aa23.14■■□□□ 1.29
LSM6-202ENST00000502781 NUP43Q8NFH3 380 aa23.14■■□□□ 1.29
LSM6-202ENST00000502781 PAQR8Q8TEZ7 354 aa23.14■■□□□ 1.29
LSM6-202ENST00000502781 MS4A4EQ96PG1 132 aa23.14■■□□□ 1.29
LSM6-202ENST00000502781 ZBTB18Q99592 522 aa23.14■■□□□ 1.29
LSM6-202ENST00000502781 KLF13Q9Y2Y9 288 aaPredicted RBP23.14■■□□□ 1.29
LSM6-202ENST00000502781 CHCHD2Q9Y6H1 151 aaPredicted RBP23.14■■□□□ 1.29
LSM6-202ENST00000502781 NBASA2RRP1 2371 aa23.13■■□□□ 1.29
LSM6-202ENST00000502781 NUP214P35658 2090 aaPredicted RBP23.13■■□□□ 1.29
LSM6-202ENST00000502781 ASPDHA6ND91 283 aa23.13■■□□□ 1.29
LSM6-202ENST00000502781 TTC36A6NLP5 189 aa23.13■■□□□ 1.29
LSM6-202ENST00000502781 CAPN14A8MX76 684 aa23.13■■□□□ 1.29
LSM6-202ENST00000502781 SLC28A2O43868 658 aa23.13■■□□□ 1.29
LSM6-202ENST00000502781 TROVE2P10155 538 aaKnown RBP eCLIP23.13■■□□□ 1.29
LSM6-202ENST00000502781 TMED10P49755 219 aaKnown RBP23.13■■□□□ 1.29
LSM6-202ENST00000502781 ATP4BP51164 291 aa23.13■■□□□ 1.29
LSM6-202ENST00000502781 DGKQP52824 942 aa23.13■■□□□ 1.29
LSM6-202ENST00000502781 PRR5P85299 388 aa23.13■■□□□ 1.29
LSM6-202ENST00000502781 TLE1Q04724 770 aa23.13■■□□□ 1.29
LSM6-202ENST00000502781 ZNF155Q12901 538 aaPredicted RBP23.13■■□□□ 1.29
LSM6-202ENST00000502781 MAPKAPK3Q16644 382 aa23.13■■□□□ 1.29
LSM6-202ENST00000502781 PAOXQ6QHF9 649 aa23.13■■□□□ 1.29
LSM6-202ENST00000502781 OR9I1Q8NGQ6 314 aa23.13■■□□□ 1.29
LSM6-202ENST00000502781 CPT1CQ8TCG5 803 aa23.13■■□□□ 1.29
LSM6-202ENST00000502781 SFXN5Q8TD22 340 aa23.13■■□□□ 1.29
LSM6-202ENST00000502781 CCDC115Q96NT0 180 aa23.13■■□□□ 1.29
LSM6-202ENST00000502781 BTNL2Q9UIR0 455 aa23.13■■□□□ 1.29
LSM6-202ENST00000502781 COPG1Q9Y678 874 aaKnown RBP23.13■■□□□ 1.29
LSM6-202ENST00000502781 A0A0G2JND7 137 aa23.12■■□□□ 1.29
LSM6-202ENST00000502781 PPM1BO75688 479 aa23.12■■□□□ 1.29
LSM6-202ENST00000502781 RASAL1O95294 804 aa23.12■■□□□ 1.29
LSM6-202ENST00000502781 IL6P05231 212 aa23.12■■□□□ 1.29
LSM6-202ENST00000502781 CCL3P10147 92 aa23.12■■□□□ 1.29
LSM6-202ENST00000502781 CCT3P49368 545 aaKnown RBP23.12■■□□□ 1.29
LSM6-202ENST00000502781 MFSD12Q6NUT3 480 aa23.12■■□□□ 1.29
LSM6-202ENST00000502781 ZCCHC12Q6PEW1 402 aa23.12■■□□□ 1.29
LSM6-202ENST00000502781 ANKRD46Q86W74 232 aa23.12■■□□□ 1.29
LSM6-202ENST00000502781 SLC34A3Q8N130 599 aa23.12■■□□□ 1.29
LSM6-202ENST00000502781 OR10G3Q8NGC4 313 aa23.12■■□□□ 1.29
LSM6-202ENST00000502781 GOT1L1Q8NHS2 421 aaPredicted RBP23.12■■□□□ 1.29
LSM6-202ENST00000502781 MOAP1Q96BY2 351 aa23.12■■□□□ 1.29
LSM6-202ENST00000502781 DEPPQ9NTK1 212 aa23.12■■□□□ 1.29
LSM6-202ENST00000502781 ZCCHC3Q9NUD5 404 aaKnown RBP23.12■■□□□ 1.29
LSM6-202ENST00000502781 TMEM45AQ9NWC5 275 aa23.12■■□□□ 1.29
LSM6-202ENST00000502781 CFLARO15519 480 aa23.11■■□□□ 1.29
LSM6-202ENST00000502781 ABCB1P08183 1280 aaPredicted RBP23.11■■□□□ 1.29
LSM6-202ENST00000502781 PRKAG1P54619 331 aa23.11■■□□□ 1.29
LSM6-202ENST00000502781 FBXW4P57775 412 aa23.11■■□□□ 1.29
LSM6-202ENST00000502781 STX1BP61266 288 aa23.11■■□□□ 1.29
LSM6-202ENST00000502781 METTL21CQ5VZV1 264 aa23.11■■□□□ 1.29
LSM6-202ENST00000502781 ZNF605Q86T29 641 aa23.11■■□□□ 1.29
LSM6-202ENST00000502781 SLC44A2Q8IWA5 706 aaPredicted RBP23.11■■□□□ 1.29
LSM6-202ENST00000502781 SULF2Q8IWU5 870 aa23.11■■□□□ 1.29
LSM6-202ENST00000502781 PRR22Q8IZ63 422 aa23.11■■□□□ 1.29
LSM6-202ENST00000502781 CDRT4Q8N9R6 151 aa23.11■■□□□ 1.29
LSM6-202ENST00000502781 OR56A1Q8NGH5 318 aa23.11■■□□□ 1.29
LSM6-202ENST00000502781 GRHL3Q8TE85 626 aa23.11■■□□□ 1.29
LSM6-202ENST00000502781 OMA1Q96E52 524 aa23.11■■□□□ 1.29
LSM6-202ENST00000502781 SECISBP2Q96T21 854 aaKnown RBP23.11■■□□□ 1.29
LSM6-202ENST00000502781 TMEM120AQ9BXJ8 343 aa23.11■■□□□ 1.29
LSM6-202ENST00000502781 ZNF385DQ9H6B1 395 aa23.11■■□□□ 1.29
LSM6-202ENST00000502781 ASF1BQ9NVP2 202 aa23.11■■□□□ 1.29
LSM6-202ENST00000502781 GPATCH2Q9NW75 528 aa23.11■■□□□ 1.29
LSM6-202ENST00000502781 SNX8Q9Y5X2 465 aa23.11■■□□□ 1.29
LSM6-202ENST00000502781 FAM234BA2RU67 622 aa23.1■■□□□ 1.29
LSM6-202ENST00000502781 NKX2-2O95096 273 aa23.1■■□□□ 1.29
LSM6-202ENST00000502781 HMGN2P05204 90 aaKnown RBP23.1■■□□□ 1.29
LSM6-202ENST00000502781 POLR2JP52435 117 aaKnown RBP23.1■■□□□ 1.29
LSM6-202ENST00000502781 LRRC74AQ0VAA2 488 aa23.1■■□□□ 1.29
LSM6-202ENST00000502781 PLCXD2Q0VAA5 305 aa23.1■■□□□ 1.29
LSM6-202ENST00000502781 SLC22A10Q63ZE4 541 aa23.1■■□□□ 1.29
LSM6-202ENST00000502781 ZNF324BQ6AW86 544 aaPredicted RBP23.1■■□□□ 1.29
LSM6-202ENST00000502781 OR4N2Q8NGD1 307 aa23.1■■□□□ 1.29
LSM6-202ENST00000502781 TMBIM1Q969X1 311 aa23.1■■□□□ 1.29
LSM6-202ENST00000502781 NTNG2Q96CW9 530 aa23.1■■□□□ 1.29
LSM6-202ENST00000502781 SLC35A4Q96G79 324 aa23.1■■□□□ 1.29
LSM6-202ENST00000502781 FRMD6Q96NE9 622 aa23.1■■□□□ 1.29
LSM6-202ENST00000502781 OR52E6Q96RD3 313 aa23.1■■□□□ 1.29
LSM6-202ENST00000502781 EQTNQ9NQ60 294 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms