RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 CDKL2Q92772 493 aa12.6□□□□□ -0.39
CCDC58-207ENST00000498466 DTNBP1Q96EV8 351 aa12.6□□□□□ -0.39
CCDC58-207ENST00000498466 ZNF845Q96IR2 970 aaPredicted RBP12.6□□□□□ -0.39
CCDC58-207ENST00000498466 GPR22Q99680 433 aa12.6□□□□□ -0.39
CCDC58-207ENST00000498466 FBXL2Q9UKC9 423 aa12.6□□□□□ -0.39
CCDC58-207ENST00000498466 TSC22D4Q9Y3Q8 395 aa12.6□□□□□ -0.39
CCDC58-207ENST00000498466 MED12Q93074 2177 aa12.59□□□□□ -0.39
CCDC58-207ENST00000498466 CXorf49A8MYA2 514 aaPredicted RBP12.59□□□□□ -0.39
CCDC58-207ENST00000498466 H0YIV9 168 aa12.59□□□□□ -0.39
CCDC58-207ENST00000498466 KERAO60938 352 aa12.59□□□□□ -0.39
CCDC58-207ENST00000498466 IFNA2P01563 188 aa12.59□□□□□ -0.39
CCDC58-207ENST00000498466 CPMP14384 443 aa12.59□□□□□ -0.39
CCDC58-207ENST00000498466 PAX1P15863 534 aa12.59□□□□□ -0.39
CCDC58-207ENST00000498466 PORP16435 677 aaPredicted RBP12.59□□□□□ -0.39
CCDC58-207ENST00000498466 S1PR1P21453 382 aa12.59□□□□□ -0.39
CCDC58-207ENST00000498466 KIR2DL2P43627 348 aaPredicted RBP12.59□□□□□ -0.39
CCDC58-207ENST00000498466 HMGCS1Q01581 520 aa12.59□□□□□ -0.39
CCDC58-207ENST00000498466 KRTAP1-1Q07627 177 aa12.59□□□□□ -0.39
CCDC58-207ENST00000498466 EXOSC7Q15024 291 aaKnown RBP12.59□□□□□ -0.39
CCDC58-207ENST00000498466 ZKSCAN8Q15776 578 aaPredicted RBP12.59□□□□□ -0.39
CCDC58-207ENST00000498466 HEPHL1Q6MZM0 1159 aa12.59□□□□□ -0.39
CCDC58-207ENST00000498466 PODNL1Q6PEZ8 512 aa12.59□□□□□ -0.39
CCDC58-207ENST00000498466 RAPH1Q70E73 1250 aa12.59□□□□□ -0.39
CCDC58-207ENST00000498466 ISCA2Q86U28 154 aa12.59□□□□□ -0.39
CCDC58-207ENST00000498466 UBQLNLQ8IYU4 475 aa12.59□□□□□ -0.39
CCDC58-207ENST00000498466 ZBED8Q8IZ13 594 aa12.59□□□□□ -0.39
CCDC58-207ENST00000498466 TMCO6Q96DC7 493 aa12.59□□□□□ -0.39
CCDC58-207ENST00000498466 RBBP8Q99708 897 aa12.59□□□□□ -0.39
CCDC58-207ENST00000498466 KLHL4Q9C0H6 718 aa12.59□□□□□ -0.39
CCDC58-207ENST00000498466 ZNF701Q9NV72 531 aaPredicted RBP12.59□□□□□ -0.39
CCDC58-207ENST00000498466 HEY2Q9UBP5 337 aa12.59□□□□□ -0.39
CCDC58-207ENST00000498466 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.58□□□□□ -0.4
CCDC58-207ENST00000498466 RNF223E7ERA6 249 aa12.58□□□□□ -0.4
CCDC58-207ENST00000498466 SEC31AO94979 1220 aaKnown RBP12.58□□□□□ -0.4
CCDC58-207ENST00000498466 TP53P04637 393 aaPredicted RBP12.58□□□□□ -0.4
CCDC58-207ENST00000498466 NEK2P51955 445 aa12.58□□□□□ -0.4
CCDC58-207ENST00000498466 VEZF1Q14119 521 aa12.58□□□□□ -0.4
CCDC58-207ENST00000498466 CAPRIN1Q14444 709 aaKnown RBP12.58□□□□□ -0.4
CCDC58-207ENST00000498466 BCL2A1Q16548 175 aa12.58□□□□□ -0.4
CCDC58-207ENST00000498466 PRICKLE4Q2TBC4 344 aa12.58□□□□□ -0.4
CCDC58-207ENST00000498466 OR5M10Q6IEU7 315 aa12.58□□□□□ -0.4
CCDC58-207ENST00000498466 FAM111BQ6SJ93 734 aa12.58□□□□□ -0.4
CCDC58-207ENST00000498466 ZNF704Q6ZNC4 412 aaPredicted RBP12.58□□□□□ -0.4
CCDC58-207ENST00000498466 C22orf34Q6ZV56 151 aa12.58□□□□□ -0.4
CCDC58-207ENST00000498466 KLHL7Q8IXQ5 586 aa12.58□□□□□ -0.4
CCDC58-207ENST00000498466 ZNF610Q8N9Z0 462 aa12.58□□□□□ -0.4
CCDC58-207ENST00000498466 IGFBPL1Q8WX77 278 aa12.58□□□□□ -0.4
CCDC58-207ENST00000498466 CAVIN3Q969G5 261 aa12.58□□□□□ -0.4
CCDC58-207ENST00000498466 COL21A1Q96P44 957 aa12.58□□□□□ -0.4
CCDC58-207ENST00000498466 ATOH8Q96SQ7 321 aa12.58□□□□□ -0.4
CCDC58-207ENST00000498466 CPNE1Q99829 537 aa12.58□□□□□ -0.4
CCDC58-207ENST00000498466 TRIM31Q9BZY9 425 aa12.58□□□□□ -0.4
CCDC58-207ENST00000498466 NMRAL1Q9HBL8 299 aa12.58□□□□□ -0.4
CCDC58-207ENST00000498466 PLLPQ9Y342 182 aa12.58□□□□□ -0.4
CCDC58-207ENST00000498466 LRRC14BA6NHZ5 514 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 GOLGA6L10A6NI86 522 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 OR6C70A6NIJ9 312 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 EFCAB8A8MWE9 144 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 E7ESA3 106 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 FOXE1O00358 373 aaPredicted RBP12.57□□□□□ -0.4
CCDC58-207ENST00000498466 EMC8O43402 210 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 REM1O75628 298 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 CGAP01215 116 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 KLK1P06870 262 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 C8BP07358 591 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 CD8BP10966 210 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 PEPDP12955 493 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 TBXA2RP21731 343 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 DPP4P27487 766 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 SSTR1P30872 391 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 DEKP35659 375 aaKnown RBP12.57□□□□□ -0.4
CCDC58-207ENST00000498466 FEN1P39748 380 aaKnown RBP12.57□□□□□ -0.4
CCDC58-207ENST00000498466 GP5P40197 560 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 PIK3CGP48736 1102 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 DR1Q01658 176 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 MAP4K2Q12851 820 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 DLG1Q12959 904 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 CLEC12BQ2HXU8 276 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 EXOC3L2Q2M3D2 409 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 BEX5Q5H9J7 111 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 TBC1D1Q86TI0 1168 aaPredicted RBP12.57□□□□□ -0.4
CCDC58-207ENST00000498466 LRRC8AQ8IWT6 810 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 OR52R1Q8NGF1 315 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 WDR20Q8TBZ3 569 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 TMEM158Q8WZ71 300 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 FIG4Q92562 907 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 TMBIM1Q969X1 311 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 SERPINI1Q99574 410 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 PSD3Q9NYI0 1048 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 MAT2BQ9NZL9 334 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 PRODH2Q9UF12 536 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 SNX12Q9UMY4 172 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 PROCRQ9UNN8 238 aa12.57□□□□□ -0.4
CCDC58-207ENST00000498466 MRPS18CQ9Y3D5 142 aaKnown RBP12.57□□□□□ -0.4
CCDC58-207ENST00000498466 MED12LQ86YW9 2145 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 EXPH5Q8NEV8 1989 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 DSCAMO60469 2012 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 CHD3Q12873 2000 aaKnown RBP12.56□□□□□ -0.4
CCDC58-207ENST00000498466 UQCRHLA0A096LP55 91 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 FRG2CA6NGY1 282 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms