RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 ZNF354BQ96LW1 612 aa7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 DGAT2Q96PD7 388 aa7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 MBOAT4Q96T53 435 aa7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 PELOQ9BRX2 385 aaKnown RBP7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 NDC1Q9BTX1 674 aa7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 GTPBP2Q9BX10 602 aaKnown RBP7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 SPRTNQ9H040 489 aaPredicted RBP7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 TOR3AQ9H497 397 aa7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 SOX17Q9H6I2 414 aaPredicted RBP7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 SMURF2Q9HAU4 748 aa7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 CLK4Q9HAZ1 481 aaKnown RBP7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 BCL2L10Q9HD36 194 aa7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 BATF3Q9NR55 127 aa7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 GIN1Q9NXP7 522 aa7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 UBAP1Q9NZ09 502 aa7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 NDUFAF4Q9P032 175 aa7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 PDP1Q9P0J1 537 aaPredicted RBP7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 NTMQ9P121 344 aa7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 SEMA5BQ9P283 1151 aa7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 PDP2Q9P2J9 529 aa7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 SLC13A4Q9UKG4 626 aa7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 ATXN7L1Q9ULK2 861 aaPredicted RBP7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 SLC6A14Q9UN76 642 aa7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 C19orf53Q9UNZ5 99 aaPredicted RBP7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 LIPT1Q9Y234 373 aa7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 SLC9A8Q9Y2E8 581 aa7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 SH3GLB1Q9Y371 365 aa7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 FAM32AQ9Y421 112 aaKnown RBP7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 LYVE1Q9Y5Y7 322 aa7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 MAU2Q9Y6X3 613 aa7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 ENPP4Q9Y6X5 453 aa7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 U3KQA8 63 aa7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 DNAH14Q0VDD8 3507 aa7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 EML6Q6ZMW3 1958 aa7.55□□□□□ -1.2
PDZRN3-212ENST00000498048 A0A0G2JPF8 293 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 A0A1B0GX78 115 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 EME2A4GXA9 379 aaPredicted RBP7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 A8MVJ9 347 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 HNRNPCL2B2RXH8 293 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 HNRNPCL3B7ZW38 293 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 H0YAE9 185 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 TGFBR3LH3BV60 316 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 J3KTA2 159 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 M0R3H8 397 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 CLDN4O14493 209 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 TOX3O15405 576 aaPredicted RBP7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 PLOD3O60568 738 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 PRAMEF2O60811 474 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 NME6O75414 186 aaPredicted RBP7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 UGT2B17O75795 530 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 CPNE6O95741 557 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 CBX7O95931 251 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 RECKO95980 971 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 AK1P00568 194 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 GNAO1P09471 354 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 MSL3P1P0C860 447 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 SP9P0CG40 484 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 SLC35E2P0CK97 266 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 SMIM18P0DKX4 95 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 HNRNPCL4P0DMR1 293 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 ITGAMP11215 1152 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 FOLR1P15328 257 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 RHCEP18577 417 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 MAOAP21397 527 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 YAP1P46937 504 aaKnown RBP7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 KCNJ5P48544 419 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 PDX1P52945 283 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 CCL7P80098 99 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 KCNAB2Q13303 367 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 ANGPT1Q15389 498 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 DUSP5Q16690 384 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 EXOC3L2Q2M3D2 409 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 ZNF528Q3MIS6 628 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 IQCCQ4KMZ1 466 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 TRMT12Q53H54 448 aaKnown RBP7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 FGD3Q5JSP0 725 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 DCST2Q5T1A1 773 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 YOD1Q5VVQ6 348 aaPredicted RBP7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 MLIPQ5VWP3 458 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 HEPHL1Q6MZM0 1159 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 TMEM71Q6P5X7 295 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 SLC23A3Q6PIS1 610 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 FRRS1Q6ZNA5 592 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 HMGN2P46Q86SG4 172 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 ZNF605Q86T29 641 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 CDRT4Q8N9R6 151 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 ATG16L2Q8NAA4 619 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 OR10G2Q8NGC3 310 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 OR52R1Q8NGF1 315 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 OR51Q1Q8NH59 317 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 PHF10Q8WUB8 498 aaKnown RBP7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 APOBEC4Q8WW27 367 aaKnown RBP7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 CCDC74BQ96LY2 380 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 TRNT1Q96Q11 434 aaKnown RBP7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 OR1F2PQ96R84 312 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 STACQ99469 402 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 PIP5K1AQ99755 562 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 DPYSL5Q9BPU6 564 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 CNPPD1Q9BV87 410 aa7.54□□□□□ -1.2
PDZRN3-212ENST00000498048 YIPF2Q9BWQ6 316 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms