RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 USP8P40818 1118 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 MATKP42679 507 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 PLA2G16P53816 162 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 RGS8P57771 180 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-224ENST00000497488 GANABQ14697 944 aaKnown RBP5.47□□□□□ -1.53
BRCA1-224ENST00000497488 CHRNA6Q15825 494 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 FAM83EQ2M2I3 478 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 TMEM35AQ53FP2 167 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 PLCXD3Q63HM9 321 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 TYW3Q6IPR3 259 aaKnown RBP5.47□□□□□ -1.53
BRCA1-224ENST00000497488 KCNIP4Q6PIL6 250 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 TMEM220Q6QAJ8 160 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 PARM1Q6UWI2 310 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 DPY19L2P2Q6ZN68 376 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 VTCN1Q7Z7D3 282 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 LDLRAD3Q86YD5 345 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 C1QL4Q86Z23 238 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 KRTAP19-1Q8IUB9 90 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 PARP8Q8N3A8 854 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 TRIML2Q8N7C3 387 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 LINC00469Q8N7U9 141 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 MAB21L3Q8N8X9 362 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 FAM83FQ8NEG4 500 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-224ENST00000497488 OR4K14Q8NGD5 310 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 OR4C15Q8NGM1 316 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 OR1L4Q8NGR5 311 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 SCFD1Q8WVM8 642 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 TCP11Q8WWU5 503 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 MSANTD3Q96H12 275 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 ZBED3Q96IU2 234 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-224ENST00000497488 C7orf34Q96L11 122 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 ZNF396Q96N95 335 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-224ENST00000497488 TSNARE1Q96NA8 513 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 AMDHD1Q96NU7 426 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 CCT8L2Q96SF2 557 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 RIT2Q99578 217 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 URM1Q9BTM9 101 aaKnown RBP5.47□□□□□ -1.53
BRCA1-224ENST00000497488 VIPAS39Q9H9C1 493 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 UBTD1Q9HAC8 227 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 PARVGQ9HBI0 331 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 A4GALTQ9NPC4 353 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 CHST11Q9NPF2 352 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 OLFML3Q9NRN5 406 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 MRPL22Q9NWU5 206 aaKnown RBP5.47□□□□□ -1.53
BRCA1-224ENST00000497488 IL36AQ9UHA7 158 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 ZDHHC2Q9UIJ5 367 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 RNF6Q9Y252 685 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 ITSN1Q15811 1721 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 CRYBG1Q9Y4K1 1723 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 WDR17Q8IZU2 1322 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 BCL9LQ86UU0 1499 aa5.46□□□□□ -1.53
BRCA1-224ENST00000497488 CCDC7Q96M83 1385 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 IGHV4-28A0A0C4DH34 117 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 A0A0J9YYE9 177 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 H0YL77 283 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 WDR1O75083 606 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 RFPL2O75678 378 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 TGM6O95932 706 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 TRBC1P01850 177 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 GSTT2P0CG29 244 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 GSTT2BP0CG30 244 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 FAM106CPP0CH98 169 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 CTSAP10619 480 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 CSTF2P33240 577 aaKnown RBP eCLIP5.46□□□□□ -1.54
BRCA1-224ENST00000497488 HTR5AP47898 357 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 CASP4P49662 377 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 RARRES1P49788 294 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 MAP3K7CLP57077 242 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 BNIP1Q12981 228 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 HNF4GQ14541 408 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 ZNF234Q14588 700 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 INPP5JQ15735 1006 aaPredicted RBP5.46□□□□□ -1.54
BRCA1-224ENST00000497488 ZNF699Q32M78 642 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 GGTA1PQ4G0N0 100 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 SLC25A53Q5H9E4 307 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 LIPNQ5VXI9 398 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 OR2A2Q6IF42 318 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 OGFOD2Q6N063 350 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 TMEM53Q6P2H8 277 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 ERICH5Q6P6B1 374 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 TMEM107Q6UX40 140 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 Q6YL49 198 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 TGIF2LXQ8IUE1 241 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 CD302Q8IX05 232 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 SYCE1Q8N0S2 351 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 CEP112Q8N8E3 955 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 OR13C5Q8NGS8 318 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 NANPQ8TBE9 248 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 LKAAEAR1Q8TD35 194 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 GPX8Q8TED1 209 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 PIK3R3Q92569 461 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 SGK3Q96BR1 496 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 TM4SF19Q96DZ7 209 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 C10orf90Q96M02 699 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 OR1F2PQ96R84 312 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 CDCA3Q99618 268 aaPredicted RBP5.46□□□□□ -1.54
BRCA1-224ENST00000497488 SPATA16Q9BXB7 569 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 ANKRD60Q9BZ19 345 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 SPACA1Q9HBV2 294 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 C1orf123Q9NWV4 160 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms