RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 FBXO8Q9NRD0 319 aa12.24□□□□□ -0.45
GARNL3-220ENST00000496711 TAS2R16Q9NYV7 291 aa12.24□□□□□ -0.45
GARNL3-220ENST00000496711 NTMQ9P121 344 aa12.24□□□□□ -0.45
GARNL3-220ENST00000496711 USP36Q9P275 1121 aaKnown RBP12.24□□□□□ -0.45
GARNL3-220ENST00000496711 DAPP1Q9UN19 280 aa12.24□□□□□ -0.45
GARNL3-220ENST00000496711 ENTPD2Q9Y5L3 495 aa12.24□□□□□ -0.45
GARNL3-220ENST00000496711 PMF1-BGLAPU3KQ54 211 aa12.24□□□□□ -0.45
GARNL3-220ENST00000496711 DUXAA6NLW8 204 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 C2orf74A8MZ97 194 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 C2CD4DB7Z1M9 353 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 C10orf142B7Z368 130 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 PRAMEF26H0Y7S4 382 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 AGR2O95994 175 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 TLX1P31314 330 aaPredicted RBP12.23□□□□□ -0.45
GARNL3-220ENST00000496711 TGFBR1P36897 503 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 RAB15P59190 212 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 TAS2R41P59536 307 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 TUBA1BP68363 451 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 CCINQ13939 588 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 FAM214AQ32MH5 1076 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 ARMCX4Q5H9R4 360 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 HEPHL1Q6MZM0 1159 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 CDC73Q6P1J9 531 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 C1orf94Q6P1W5 598 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 TUBA1AQ71U36 451 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 VRK2Q86Y07 508 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 SLC22A18ASQ8N1D0 253 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 OR8J1Q8NGP2 316 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 WDR36Q8NI36 951 aaKnown RBP12.23□□□□□ -0.45
GARNL3-220ENST00000496711 GPBAR1Q8TDU6 330 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 PATE1Q8WXA2 126 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 RSC1A1Q92681 617 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 RERGQ96A58 199 aaPredicted RBP12.23□□□□□ -0.45
GARNL3-220ENST00000496711 GSDMCQ9BYG8 508 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 ALOXE3Q9BYJ1 711 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 SLIRPQ9GZT3 109 aaKnown RBP12.23□□□□□ -0.45
GARNL3-220ENST00000496711 KLHL25Q9H0H3 589 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 ZBTB20Q9HC78 741 aaPredicted RBP12.23□□□□□ -0.45
GARNL3-220ENST00000496711 ANKHQ9HCJ1 492 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 CTPS2Q9NRF8 586 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 DNAJC27Q9NZQ0 273 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 CPNE7Q9UBL6 633 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 KLK4Q9Y5K2 254 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 MAGEB3O15480 346 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 IGHV4-34P06331 123 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 TNNI3P19429 210 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 GSTM3P21266 225 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 PRKAR1BP31321 381 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 UBE2IP63279 158 aaKnown RBP12.23□□□□□ -0.45
GARNL3-220ENST00000496711 SIM1P81133 766 aaPredicted RBP12.23□□□□□ -0.45
GARNL3-220ENST00000496711 RELAQ04206 551 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 RUNX2Q13950 521 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 INAVAQ3KP66 663 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 C6orf132Q5T0Z8 1188 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 MEDAGQ5VYS4 303 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 USP43Q70EL4 1123 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 ZER1Q7Z7L7 766 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 OR2L13Q8N349 312 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 SLC44A3Q8N4M1 653 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 ZNF655Q8N720 491 aaPredicted RBP12.23□□□□□ -0.45
GARNL3-220ENST00000496711 OR6Q1Q8NGQ2 317 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 ABTB1Q969K4 478 aaPredicted RBP12.23□□□□□ -0.45
GARNL3-220ENST00000496711 COL26A1Q96A83 441 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 SLC35A4Q96G79 324 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 LYRM4Q9HD34 91 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 EVA1BQ9NVM1 165 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 FAIMQ9NVQ4 179 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 TBCCD1Q9NVR7 557 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 KLHL28Q9NXS3 571 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 PTGFRNQ9P2B2 879 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 ERGIC3Q9Y282 383 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 SLC22A7Q9Y694 548 aa12.23□□□□□ -0.45
GARNL3-220ENST00000496711 LOC105369274A0A096LPK9 316 aa12.22□□□□□ -0.45
GARNL3-220ENST00000496711 LOC102723532A0A0G2JNH3 316 aa12.22□□□□□ -0.45
GARNL3-220ENST00000496711 A0A0J9YY10 115 aa12.22□□□□□ -0.45
GARNL3-220ENST00000496711 ADRA2AP08913 450 aa12.22□□□□□ -0.45
GARNL3-220ENST00000496711 HSMCR30P0CW71 290 aa12.22□□□□□ -0.45
GARNL3-220ENST00000496711 CPMP14384 443 aa12.22□□□□□ -0.45
GARNL3-220ENST00000496711 ALOX12P18054 663 aa12.22□□□□□ -0.45
GARNL3-220ENST00000496711 RGS6P49758 472 aa12.22□□□□□ -0.45
GARNL3-220ENST00000496711 PDX1P52945 283 aa12.22□□□□□ -0.45
GARNL3-220ENST00000496711 MED22Q15528 200 aa12.22□□□□□ -0.45
GARNL3-220ENST00000496711 OCLNQ16625 522 aa12.22□□□□□ -0.45
GARNL3-220ENST00000496711 ENTPD8Q5MY95 495 aa12.22□□□□□ -0.45
GARNL3-220ENST00000496711 MFSD4BQ5TF39 518 aa12.22□□□□□ -0.45
GARNL3-220ENST00000496711 FRRS1Q6ZNA5 592 aa12.22□□□□□ -0.45
GARNL3-220ENST00000496711 USP53Q70EK8 1073 aa12.22□□□□□ -0.45
GARNL3-220ENST00000496711 RNF44Q7L0R7 432 aa12.22□□□□□ -0.45
GARNL3-220ENST00000496711 WDR53Q7Z5U6 358 aaPredicted RBP12.22□□□□□ -0.45
GARNL3-220ENST00000496711 OR4N4Q8N0Y3 316 aa12.22□□□□□ -0.45
GARNL3-220ENST00000496711 IQCF1Q8N6M8 205 aa12.22□□□□□ -0.45
GARNL3-220ENST00000496711 TCEANCQ8N8B7 351 aa12.22□□□□□ -0.45
GARNL3-220ENST00000496711 KBTBD8Q8NFY9 601 aa12.22□□□□□ -0.45
GARNL3-220ENST00000496711 OR52P1PQ8NH57 321 aa12.22□□□□□ -0.45
GARNL3-220ENST00000496711 BAHD1Q8TBE0 780 aaPredicted RBP12.22□□□□□ -0.45
GARNL3-220ENST00000496711 FAM3CQ92520 227 aa12.22□□□□□ -0.45
GARNL3-220ENST00000496711 CDS1Q92903 461 aa12.22□□□□□ -0.45
GARNL3-220ENST00000496711 POLDIP3Q9BY77 421 aaKnown RBP12.22□□□□□ -0.45
GARNL3-220ENST00000496711 TCEAL2Q9H3H9 227 aaPredicted RBP12.22□□□□□ -0.45
GARNL3-220ENST00000496711 ANKRD19PQ9H560 264 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms