RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 OR10S1Q8NGN2 331 aa4.28□□□□□ -1.72
XPA-204ENST00000496104 LINC01560Q8TB33 94 aa4.28□□□□□ -1.72
XPA-204ENST00000496104 SEMA4DQ92854 862 aa4.28□□□□□ -1.72
XPA-204ENST00000496104 NUS1Q96E22 293 aa4.28□□□□□ -1.72
XPA-204ENST00000496104 DTD2Q96FN9 168 aa4.28□□□□□ -1.72
XPA-204ENST00000496104 SCMH1Q96GD3 660 aa4.28□□□□□ -1.72
XPA-204ENST00000496104 HS6ST2Q96MM7 605 aa4.28□□□□□ -1.72
XPA-204ENST00000496104 GPA33Q99795 319 aa4.28□□□□□ -1.72
XPA-204ENST00000496104 BCL7BQ9BQE9 202 aa4.28□□□□□ -1.72
XPA-204ENST00000496104 GORASP1Q9BQQ3 440 aa4.28□□□□□ -1.72
XPA-204ENST00000496104 REG4Q9BYZ8 158 aa4.28□□□□□ -1.72
XPA-204ENST00000496104 RAB34Q9BZG1 259 aa4.28□□□□□ -1.72
XPA-204ENST00000496104 MIS12Q9H081 205 aa4.28□□□□□ -1.72
XPA-204ENST00000496104 ATG10Q9H0Y0 220 aa4.28□□□□□ -1.72
XPA-204ENST00000496104 ANKZF1Q9H8Y5 726 aa4.28□□□□□ -1.72
XPA-204ENST00000496104 SLC40A1Q9NP59 571 aa4.28□□□□□ -1.72
XPA-204ENST00000496104 PHPT1Q9NRX4 125 aaPredicted RBP4.28□□□□□ -1.72
XPA-204ENST00000496104 CISHQ9NSE2 258 aa4.28□□□□□ -1.72
XPA-204ENST00000496104 ZNF701Q9NV72 531 aaPredicted RBP4.28□□□□□ -1.72
XPA-204ENST00000496104 GPATCH2LQ9NWQ4 482 aa4.28□□□□□ -1.72
XPA-204ENST00000496104 ING3Q9NXR8 418 aa4.28□□□□□ -1.72
XPA-204ENST00000496104 SMPD3Q9NY59 655 aaPredicted RBP4.28□□□□□ -1.72
XPA-204ENST00000496104 SLC23A2Q9UGH3 650 aa4.28□□□□□ -1.72
XPA-204ENST00000496104 GNPTGQ9UJJ9 305 aa4.28□□□□□ -1.72
XPA-204ENST00000496104 A4GNTQ9UNA3 340 aa4.28□□□□□ -1.72
XPA-204ENST00000496104 PADI2Q9Y2J8 665 aa4.28□□□□□ -1.72
XPA-204ENST00000496104 CMAHPQ9Y471 501 aa4.28□□□□□ -1.72
XPA-204ENST00000496104 HEATR5AQ86XA9 2040 aa4.28□□□□□ -1.73
XPA-204ENST00000496104 HERC1Q15751 4861 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 C5orf51A6NDU8 294 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 ZNF879B4DU55 563 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 TMEM150CB9EJG8 249 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 HRKO00198 91 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 TRAFD1O14545 582 aaPredicted RBP4.27□□□□□ -1.73
XPA-204ENST00000496104 CIDEAO60543 219 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 WBP4O75554 376 aaKnown RBP4.27□□□□□ -1.73
XPA-204ENST00000496104 OR6B1O95007 311 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 PTBP3O95758 552 aaKnown RBP4.27□□□□□ -1.73
XPA-204ENST00000496104 SLC16A8O95907 504 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 CYP1A1P04798 512 aaPredicted RBP4.27□□□□□ -1.73
XPA-204ENST00000496104 ATP1A1P05023 1023 aaKnown RBP4.27□□□□□ -1.73
XPA-204ENST00000496104 FGF4P08620 206 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 ELFN1P0C7U0 828 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 COX6A1P12074 109 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 TNFRSF1AP19438 455 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 PRKACBP22694 351 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 LOXP28300 417 aaPredicted RBP4.27□□□□□ -1.73
XPA-204ENST00000496104 EPHA3P29320 983 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 CCR1P32246 355 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 BMI1P35226 326 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 NUP62P37198 522 aaPredicted RBP4.27□□□□□ -1.73
XPA-204ENST00000496104 MC3RP41968 323 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 SUOXP51687 545 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 MVDP53602 400 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 SNRPD1P62314 119 aaKnown RBP4.27□□□□□ -1.73
XPA-204ENST00000496104 NUCB2P80303 420 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 PIGFQ07326 219 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 TOP3AQ13472 1001 aaPredicted RBP4.27□□□□□ -1.73
XPA-204ENST00000496104 ALKBH1Q13686 389 aaKnown RBP4.27□□□□□ -1.73
XPA-204ENST00000496104 CCNIQ14094 377 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 ACOX1Q15067 660 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 MAPK11Q15759 364 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 FBXL19-AS1Q494R0 122 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 CMPK2Q5EBM0 449 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 METTL11BQ5VVY1 283 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 CYB5D1Q6P9G0 228 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 SHISA6Q6ZSJ9 500 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 LARP4Q71RC2 724 aaKnown RBP eCLIP4.27□□□□□ -1.73
XPA-204ENST00000496104 PHLDB2Q86SQ0 1253 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 STK32CQ86UX6 486 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 LUZP1Q86V48 1076 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 AMZ2Q86W34 360 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 CAMK1DQ8IU85 385 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 UXS1Q8NBZ7 420 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 CCNYQ8ND76 341 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 ABHD4Q8TB40 342 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 TBC1D15Q8TC07 691 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 LRRC8CQ8TDW0 803 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 ACTRT2Q8TDY3 377 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 SLC26A7Q8TE54 656 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 EXT2Q93063 718 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 LRRC39Q96DD0 335 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 RBMXL1Q96E39 390 aaKnown RBP4.27□□□□□ -1.73
XPA-204ENST00000496104 ZBED6CLQ96FA7 236 aaPredicted RBP4.27□□□□□ -1.73
XPA-204ENST00000496104 ELMOD3Q96FG2 381 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 DHTKD1Q96HY7 919 aaPredicted RBP4.27□□□□□ -1.73
XPA-204ENST00000496104 C8orf76Q96K31 380 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 ARL5BQ96KC2 179 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 SMIM14Q96QK8 99 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 OR2A14Q96R47 310 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 USP28Q96RU2 1077 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 NPAS2Q99743 824 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 NRTNQ99748 197 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 SIKE1Q9BRV8 207 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 TTYH2Q9BSA4 534 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 TMEM79Q9BSE2 394 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 OSBPL8Q9BZF1 889 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 CTDSP1Q9GZU7 261 aa4.27□□□□□ -1.73
XPA-204ENST00000496104 IQCGQ9H095 443 aaKnown RBP4.27□□□□□ -1.73
XPA-204ENST00000496104 DDX47Q9H0S4 455 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms