RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 CCL3P10147 92 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 DRD5P21918 477 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 NME2P22392 152 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 NRG3P56975 720 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 FBXW4P57775 412 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 GPR85P60893 370 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 DCAF7P61962 342 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 TLE1Q04724 770 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 RPUSD3Q6P087 351 aaKnown RBP17.91■□□□□ 0.46
HDAC4-212ENST00000495497 RTL4Q6ZR62 310 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 MIER2Q8N344 545 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 PSD4Q8NDX1 1056 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 FAM13CQ8NE31 585 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 OR10G3Q8NGC4 313 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 OR4A15Q8NGL6 344 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 OR5AK3PQ8NH89 298 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 FBXO30Q8TB52 745 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 CPT1CQ8TCG5 803 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 HSPBAP1Q96EW2 488 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 GIMAP5Q96F15 307 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 C16orf58Q96GQ5 468 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 ZNF317Q96PQ6 595 aaPredicted RBP17.91■□□□□ 0.46
HDAC4-212ENST00000495497 BTBD9Q96Q07 612 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 YIPF4Q9BSR8 244 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 C3orf14Q9HBI5 128 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 TIMMDC1Q9NPL8 285 aa17.91■□□□□ 0.46
HDAC4-212ENST00000495497 ZCCHC3Q9NUD5 404 aaKnown RBP17.91■□□□□ 0.46
HDAC4-212ENST00000495497 COPG1Q9Y678 874 aaKnown RBP17.91■□□□□ 0.46
HDAC4-212ENST00000495497 PRSS51A0A1B0GVH4 220 aa17.9■□□□□ 0.46
HDAC4-212ENST00000495497 PYCARD-AS1I3L0S3 204 aa17.9■□□□□ 0.46
HDAC4-212ENST00000495497 IFI6P09912 130 aa17.9■□□□□ 0.46
HDAC4-212ENST00000495497 TROVE2P10155 538 aaKnown RBP eCLIP17.9■□□□□ 0.46
HDAC4-212ENST00000495497 NCF2P19878 526 aaPredicted RBP17.9■□□□□ 0.46
HDAC4-212ENST00000495497 ABCD3P28288 659 aa17.9■□□□□ 0.46
HDAC4-212ENST00000495497 SOAT1P35610 550 aa17.9■□□□□ 0.46
HDAC4-212ENST00000495497 CCT3P49368 545 aaKnown RBP17.9■□□□□ 0.46
HDAC4-212ENST00000495497 PSG6Q00889 435 aa17.9■□□□□ 0.46
HDAC4-212ENST00000495497 PLCXD2Q0VAA5 305 aa17.9■□□□□ 0.46
HDAC4-212ENST00000495497 DPY19L1Q2PZI1 675 aa17.9■□□□□ 0.46
HDAC4-212ENST00000495497 SPDYE7PQ495Y7 208 aa17.9■□□□□ 0.46
HDAC4-212ENST00000495497 ANXA8L1Q5VT79 327 aa17.9■□□□□ 0.46
HDAC4-212ENST00000495497 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.9■□□□□ 0.46
HDAC4-212ENST00000495497 ZNF605Q86T29 641 aa17.9■□□□□ 0.46
HDAC4-212ENST00000495497 SULF2Q8IWU5 870 aa17.9■□□□□ 0.46
HDAC4-212ENST00000495497 TMEM178AQ8NBL3 297 aa17.9■□□□□ 0.46
HDAC4-212ENST00000495497 PSMA8Q8TAA3 256 aa17.9■□□□□ 0.46
HDAC4-212ENST00000495497 OMA1Q96E52 524 aa17.9■□□□□ 0.46
HDAC4-212ENST00000495497 OTUB1Q96FW1 271 aaPredicted RBP17.9■□□□□ 0.46
HDAC4-212ENST00000495497 DEPPQ9NTK1 212 aa17.9■□□□□ 0.46
HDAC4-212ENST00000495497 ASF1BQ9NVP2 202 aa17.9■□□□□ 0.46
HDAC4-212ENST00000495497 NTMQ9P121 344 aa17.9■□□□□ 0.46
HDAC4-212ENST00000495497 PCDHGB6Q9Y5F9 930 aa17.9■□□□□ 0.46
HDAC4-212ENST00000495497 COL6A6A6NMZ7 2263 aa17.89■□□□□ 0.46
HDAC4-212ENST00000495497 CFAP46Q8IYW2 2715 aa17.89■□□□□ 0.45
HDAC4-212ENST00000495497 A0A0G2JMM0 328 aa17.89■□□□□ 0.45
HDAC4-212ENST00000495497 A0A1W2PPB8 328 aa17.89■□□□□ 0.45
HDAC4-212ENST00000495497 A0A1W2PRS3 328 aa17.89■□□□□ 0.45
HDAC4-212ENST00000495497 KIR3DP1A8MWS1 328 aa17.89■□□□□ 0.45
HDAC4-212ENST00000495497 TO15178 435 aa17.89■□□□□ 0.45
HDAC4-212ENST00000495497 PEX1O43933 1283 aa17.89■□□□□ 0.45
HDAC4-212ENST00000495497 RASAL1O95294 804 aa17.89■□□□□ 0.45
HDAC4-212ENST00000495497 PGRP06401 933 aa17.89■□□□□ 0.45
HDAC4-212ENST00000495497 CD1EP15812 388 aa17.89■□□□□ 0.45
HDAC4-212ENST00000495497 POLR2JP52435 117 aaKnown RBP17.89■□□□□ 0.45
HDAC4-212ENST00000495497 STX1BP61266 288 aa17.89■□□□□ 0.45
HDAC4-212ENST00000495497 GAB1Q13480 694 aa17.89■□□□□ 0.45
HDAC4-212ENST00000495497 IGFBP7Q16270 282 aa17.89■□□□□ 0.45
HDAC4-212ENST00000495497 NTRK2Q16620 822 aa17.89■□□□□ 0.45
HDAC4-212ENST00000495497 SLC34A3Q8N130 599 aa17.89■□□□□ 0.45
HDAC4-212ENST00000495497 CPSF7Q8N684 471 aaKnown RBP17.89■□□□□ 0.45
HDAC4-212ENST00000495497 GLB1L3Q8NCI6 653 aaPredicted RBP17.89■□□□□ 0.45
HDAC4-212ENST00000495497 TMBIM1Q969X1 311 aa17.89■□□□□ 0.45
HDAC4-212ENST00000495497 MS4A4EQ96PG1 132 aa17.89■□□□□ 0.45
HDAC4-212ENST00000495497 OR52E6Q96RD3 313 aa17.89■□□□□ 0.45
HDAC4-212ENST00000495497 SIKE1Q9BRV8 207 aa17.89■□□□□ 0.45
HDAC4-212ENST00000495497 LMF2Q9BU23 707 aaKnown RBP17.89■□□□□ 0.45
HDAC4-212ENST00000495497 SH2D2AQ9NP31 389 aa17.89■□□□□ 0.45
HDAC4-212ENST00000495497 SPTA1P02549 2419 aa17.89■□□□□ 0.45
HDAC4-212ENST00000495497 GXYLT2A0PJZ3 443 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 PINLYPA6NC86 204 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 ACOX3O15254 700 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 REM1O75628 298 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 PPM1BO75688 479 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 ACP2P11117 423 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 PIGAP37287 484 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 RFC3P40938 356 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 MEOX1P50221 254 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 ARFIP2P53365 341 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 PRR5P85299 388 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 TP53BP2Q13625 1128 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 PRAMEF20Q5VT98 475 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 BICRALQ6AI39 1079 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 MFSD12Q6NUT3 480 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 FUNDC1Q8IVP5 155 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 VPS37AQ8NEZ2 397 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 GRHL3Q8TE85 626 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 PAQR8Q8TEZ7 354 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 STON2Q8WXE9 905 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 PIK3R3Q92569 461 aa17.88■□□□□ 0.45
HDAC4-212ENST00000495497 SLC9A6Q92581 669 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms