RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 CAPN14A8MX76 684 aa12.47□□□□□ -0.41
COL1A1-208ENST00000494334 C9JVG2 144 aa12.47□□□□□ -0.41
COL1A1-208ENST00000494334 E9PBE3 544 aa12.47□□□□□ -0.41
COL1A1-208ENST00000494334 KLRC4-KLRK1H3BQV0 150 aa12.47□□□□□ -0.41
COL1A1-208ENST00000494334 RNASET2O00584 256 aaKnown RBP12.47□□□□□ -0.41
COL1A1-208ENST00000494334 EMC8O43402 210 aa12.47□□□□□ -0.41
COL1A1-208ENST00000494334 PEX1O43933 1283 aa12.47□□□□□ -0.41
COL1A1-208ENST00000494334 CCL3P10147 92 aa12.47□□□□□ -0.41
COL1A1-208ENST00000494334 NAGAP17050 411 aa12.47□□□□□ -0.41
COL1A1-208ENST00000494334 MDH1P40925 334 aaKnown RBP12.47□□□□□ -0.41
COL1A1-208ENST00000494334 PRKAG1P54619 331 aa12.47□□□□□ -0.41
COL1A1-208ENST00000494334 FBXW4P57775 412 aa12.47□□□□□ -0.41
COL1A1-208ENST00000494334 GPR85P60893 370 aa12.47□□□□□ -0.41
COL1A1-208ENST00000494334 HBA1P69905 142 aa12.47□□□□□ -0.41
COL1A1-208ENST00000494334 FOXK1P85037 733 aa12.47□□□□□ -0.41
COL1A1-208ENST00000494334 ZNF155Q12901 538 aaPredicted RBP12.47□□□□□ -0.41
COL1A1-208ENST00000494334 DPY19L1Q2PZI1 675 aa12.47□□□□□ -0.41
COL1A1-208ENST00000494334 FAM174BQ3ZCQ3 159 aa12.47□□□□□ -0.41
COL1A1-208ENST00000494334 SLC22A10Q63ZE4 541 aa12.47□□□□□ -0.41
COL1A1-208ENST00000494334 ZNF324BQ6AW86 544 aaPredicted RBP12.47□□□□□ -0.41
COL1A1-208ENST00000494334 FAM180AQ6UWF9 173 aa12.47□□□□□ -0.41
COL1A1-208ENST00000494334 WDR53Q7Z5U6 358 aaPredicted RBP12.47□□□□□ -0.41
COL1A1-208ENST00000494334 CLECL1Q8IZS7 167 aa12.47□□□□□ -0.41
COL1A1-208ENST00000494334 CPSF7Q8N684 471 aaKnown RBP12.47□□□□□ -0.41
COL1A1-208ENST00000494334 BCORP1Q8N888 145 aa12.47□□□□□ -0.41
COL1A1-208ENST00000494334 OR10G3Q8NGC4 313 aa12.47□□□□□ -0.41
COL1A1-208ENST00000494334 OR5M3Q8NGP4 307 aa12.47□□□□□ -0.41
COL1A1-208ENST00000494334 DNAJB8Q8NHS0 232 aa12.47□□□□□ -0.41
COL1A1-208ENST00000494334 RFWD2Q8NHY2 731 aa12.47□□□□□ -0.41
COL1A1-208ENST00000494334 FAM120BQ96EK7 910 aaKnown RBP12.47□□□□□ -0.41
COL1A1-208ENST00000494334 LMF2Q9BU23 707 aaKnown RBP12.47□□□□□ -0.41
COL1A1-208ENST00000494334 CCDC134Q9H6E4 229 aa12.47□□□□□ -0.41
COL1A1-208ENST00000494334 CXorf36Q9H7Y0 433 aa12.47□□□□□ -0.41
COL1A1-208ENST00000494334 C3orf14Q9HBI5 128 aa12.47□□□□□ -0.41
COL1A1-208ENST00000494334 SDR39U1Q9NRG7 319 aaPredicted RBP12.47□□□□□ -0.41
COL1A1-208ENST00000494334 AGPAT4Q9NRZ5 378 aa12.47□□□□□ -0.41
COL1A1-208ENST00000494334 CHCHD2Q9Y6H1 151 aaPredicted RBP12.47□□□□□ -0.41
COL1A1-208ENST00000494334 PRSS51A0A1B0GVH4 220 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 PINLYPA6NC86 204 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 PYCARD-AS1I3L0S3 204 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 CFLARO15519 480 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 PPM1BO75688 479 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 SLC22A3O75751 556 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 CRYABP02511 175 aaKnown RBP12.46□□□□□ -0.41
COL1A1-208ENST00000494334 P04436 131 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 ABCB1P08183 1280 aaPredicted RBP12.46□□□□□ -0.41
COL1A1-208ENST00000494334 CNR1P21554 472 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 S100A3P33764 101 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 MAP3K8P41279 467 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 CCT3P49368 545 aaKnown RBP12.46□□□□□ -0.41
COL1A1-208ENST00000494334 TMED10P49755 219 aaKnown RBP12.46□□□□□ -0.41
COL1A1-208ENST00000494334 MEOX1P50221 254 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 DGKQP52824 942 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 PLCXD2Q0VAA5 305 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 GAB1Q13480 694 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 ANXA8L1Q5VT79 327 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 DESI1Q6ICB0 168 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 PAOXQ6QHF9 649 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 SZRD1Q7Z422 152 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 SLC44A2Q8IWA5 706 aaPredicted RBP12.46□□□□□ -0.41
COL1A1-208ENST00000494334 SLC34A3Q8N130 599 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 FAM98AQ8NCA5 519 aaKnown RBP12.46□□□□□ -0.41
COL1A1-208ENST00000494334 GLB1L3Q8NCI6 653 aaPredicted RBP12.46□□□□□ -0.41
COL1A1-208ENST00000494334 FAM13CQ8NE31 585 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 OR4N2Q8NGD1 307 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 TMBIM1Q969X1 311 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 OMA1Q96E52 524 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 FRMD6Q96NE9 622 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 NEUROD4Q9HD90 331 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 NPHS2Q9NP85 383 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 EQTNQ9NQ60 294 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 SACM1LQ9NTJ5 587 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 ZCCHC3Q9NUD5 404 aaKnown RBP12.46□□□□□ -0.41
COL1A1-208ENST00000494334 OLAHQ9NV23 265 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 ZIM2Q9NZV7 527 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 DCTN4Q9UJW0 460 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 SNX8Q9Y5X2 465 aa12.46□□□□□ -0.41
COL1A1-208ENST00000494334 ZNF462Q96JM2 2506 aa12.46□□□□□ -0.42
COL1A1-208ENST00000494334 CFAP46Q8IYW2 2715 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 A0A0G2JMM0 328 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 A0A1W2PPB8 328 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 A0A1W2PRS3 328 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 KIR3DP1A8MWS1 328 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 G3V3Y1 287 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 J3QKU1 62 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 TP53I11O14683 189 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 WISP2O76076 250 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 PGRP06401 933 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 PIGAP37287 484 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 ZFP36L2P47974 494 aaKnown RBP12.45□□□□□ -0.42
COL1A1-208ENST00000494334 DNASE1L1P49184 302 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 MRPL19P49406 292 aaKnown RBP12.45□□□□□ -0.42
COL1A1-208ENST00000494334 PRR5P85299 388 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 ZNHIT3Q15649 155 aaPredicted RBP12.45□□□□□ -0.42
COL1A1-208ENST00000494334 RNFT1Q5M7Z0 435 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 PRAMEF20Q5VT98 475 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 NUP54Q7Z3B4 507 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 ANKRD46Q86W74 232 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 FBXW8Q8N3Y1 598 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 ZFP62Q8NB50 900 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms