RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 RNF24Q9Y225 148 aa10.96□□□□□ -0.65
BRCA1-222ENST00000493919 A0A1W2PRB8 838 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 CDX4O14627 284 aaPredicted RBP10.96□□□□□ -0.66
BRCA1-222ENST00000493919 INPP4BO15327 924 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 PROM1O43490 865 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 CHP2O43745 196 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 PCDHGA12O60330 932 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 CYTIPO60759 359 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 GUSBP08236 651 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 OR8G3PP0DMU2 310 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 FPR3P25089 353 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 HTR1BP28222 390 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 GRIA1P42261 906 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 CDKN2CP42773 168 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 CDKN1BP46527 198 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 ARRB1P49407 418 aaPredicted RBP10.96□□□□□ -0.66
BRCA1-222ENST00000493919 GMFBP60983 142 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 MICAQ29983 383 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.96□□□□□ -0.66
BRCA1-222ENST00000493919 STPG1Q5TH74 334 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 DENND5AQ6IQ26 1287 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 PNCKQ6P2M8 343 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 NAPRTQ6XQN6 538 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 CHDHQ8NE62 594 aaPredicted RBP10.96□□□□□ -0.66
BRCA1-222ENST00000493919 OR6M1Q8NGM8 313 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 SNX33Q8WV41 574 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 SORT1Q99523 831 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 CRB3Q9BUF7 120 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 APOOQ9BUR5 198 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 SPATA9Q9BWV2 254 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 YTHDF1Q9BYJ9 559 aaKnown RBP10.96□□□□□ -0.66
BRCA1-222ENST00000493919 ROGDIQ9GZN7 287 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 FAM83DQ9H4H8 585 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 ZCCHC4Q9H5U6 513 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 PRDM7Q9NQW5 492 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 MED17Q9NVC6 651 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 MED9Q9NWA0 146 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 CLEC2DQ9UHP7 191 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 PKP3Q9Y446 797 aa10.96□□□□□ -0.66
BRCA1-222ENST00000493919 SPTY2D1-AS1A0A0U1RR47 76 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 C5orf51A6NDU8 294 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 NPIPA2E9PIF3 369 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 ADAMDEC1O15204 470 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 SLC16A6O15403 523 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 OR2B3O76000 313 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 SPDEFO95238 335 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 RALBP11234 206 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 BPIP17213 487 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 ATP5A1P25705 553 aaKnown RBP10.95□□□□□ -0.66
BRCA1-222ENST00000493919 SERPINF1P36955 418 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 GZMKP49863 264 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 KIAA1024LP59773 190 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 YPEL5P62699 121 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 MRPS22P82650 360 aaKnown RBP10.95□□□□□ -0.66
BRCA1-222ENST00000493919 FZD2Q14332 565 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 PTPRCAPQ14761 206 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 LASP1Q14847 261 aaKnown RBP10.95□□□□□ -0.66
BRCA1-222ENST00000493919 NFATC4Q14934 902 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 RAB39AQ14964 217 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 TCEA2Q15560 299 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 CES4AQ5XG92 561 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 DOK6Q6PKX4 331 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 ENPP7Q6UWV6 458 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 ZNF813Q6ZN06 617 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 TMEM26Q6ZUK4 368 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 FRMD7Q6ZUT3 714 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 ZNF765Q7L2R6 523 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 GPR26Q8NDV2 337 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 NETO1Q8TDF5 533 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 TREX2Q9BQ50 279 aaPredicted RBP10.95□□□□□ -0.66
BRCA1-222ENST00000493919 PHPT1Q9NRX4 125 aaPredicted RBP10.95□□□□□ -0.66
BRCA1-222ENST00000493919 TM7SF3Q9NS93 570 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 EVA1BQ9NVM1 165 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 PISDQ9UG56 409 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 KLHL21Q9UJP4 597 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 STARD10Q9Y365 291 aa10.95□□□□□ -0.66
BRCA1-222ENST00000493919 TCRBV7S3A2A0A539 114 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 CCDC154A6NI56 674 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 NXPH2O95156 264 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 CEACAM6P40199 344 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 MC3RP41968 323 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 PITPNBP48739 271 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 CDK3Q00526 305 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 MEF2AQ02078 507 aaPredicted RBP10.94□□□□□ -0.66
BRCA1-222ENST00000493919 DPTQ07507 201 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 TAF1AQ15573 450 aaPredicted RBP10.94□□□□□ -0.66
BRCA1-222ENST00000493919 CARTPTQ16568 116 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 SLC5A12Q1EHB4 618 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 HENMT1Q5T8I9 393 aaKnown RBP10.94□□□□□ -0.66
BRCA1-222ENST00000493919 METAP1DQ6UB28 335 aaPredicted RBP10.94□□□□□ -0.66
BRCA1-222ENST00000493919 FAM151BQ6UXP7 276 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 SLC16A13Q7RTY0 426 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 RD3Q7Z3Z2 195 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 BTLAQ7Z6A9 289 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 TAF8Q7Z7C8 310 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 TMEM17Q86X19 198 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 C1orf52Q8N6N3 182 aaKnown RBP10.94□□□□□ -0.66
BRCA1-222ENST00000493919 OR10A7Q8NGE5 316 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 OR13C4Q8NGS5 318 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 TMBIM1Q969X1 311 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms