RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 HPF1Q9NWY4 346 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 LRFN1Q9P244 771 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 DTX4Q9Y2E6 619 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 GPR45Q9Y5Y3 372 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 NCKAP5O14513 1909 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 A0A087WV62 115 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 PLOD3O60568 738 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 NME6O75414 186 aaPredicted RBP10.7□□□□□ -0.7
CTSA-209ENST00000493522 OR6B1O95007 311 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 CD46P15529 392 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 S100A3P33764 101 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 TRHRP34981 398 aaPredicted RBP10.7□□□□□ -0.7
CTSA-209ENST00000493522 SOX18P35713 384 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 CD96P40200 585 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 HLCSP50747 726 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 PER3P56645 1201 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 SRSF11Q05519 484 aaKnown RBP10.7□□□□□ -0.7
CTSA-209ENST00000493522 SF3A3Q12874 501 aaKnown RBP eCLIP10.7□□□□□ -0.79e-10■■■□□ 15
CTSA-209ENST00000493522 SPDYE7PQ495Y7 208 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 ZNF766Q5HY98 468 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 OPN5Q6U736 354 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 ANKRD46Q86W74 232 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 GPALPP1Q8IXQ4 340 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 PRR22Q8IZ63 422 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 TAGAPQ8N103 731 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 MIER2Q8N344 545 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 HORMAD2Q8N7B1 307 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 ZNF441Q8N8Z8 693 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 ST6GALNAC3Q8NDV1 305 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 MDS2Q8NDY4 140 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 OR5P2Q8WZ92 322 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 COQ8BQ96D53 544 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 ELP4Q96EB1 424 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 RILPQ96NA2 401 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 SIGLEC12Q96PQ1 595 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 TMEM120AQ9BXJ8 343 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 NEUROD4Q9HD90 331 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 EQTNQ9NQ60 294 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 KLHL1Q9NR64 748 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 TAS2R9Q9NYW1 312 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 ZIM2Q9NZV7 527 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 C19orf53Q9UNZ5 99 aaPredicted RBP10.7□□□□□ -0.7
CTSA-209ENST00000493522 PCDHGA10Q9Y5H3 936 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 SNX8Q9Y5X2 465 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 POLEQ07864 2286 aa10.7□□□□□ -0.7
CTSA-209ENST00000493522 SVILO95425 2214 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 CSMD2Q7Z408 3487 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 UPK1AO00322 258 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 PLOD2O00469 737 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 EMC8O43402 210 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 ZNF354AO60765 605 aaPredicted RBP10.69□□□□□ -0.7
CTSA-209ENST00000493522 ERN1O75460 977 aaKnown RBP10.69□□□□□ -0.7
CTSA-209ENST00000493522 SLC25A12O75746 678 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 NADKO95544 446 aaPredicted RBP10.69□□□□□ -0.7
CTSA-209ENST00000493522 IFI6P09912 130 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 EMDP50402 254 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 DGKQP52824 942 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 NRG3P56975 720 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 PRR5P85299 388 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 TP53BP2Q13625 1128 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 MLC1Q15049 377 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 PIGGQ5H8A4 983 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 ANXA8L1Q5VT79 327 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 C1QL3Q5VWW1 255 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 SPINK14Q6IE38 97 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 IL20RBQ6UXL0 311 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 TMEM64Q6YI46 380 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 CLECL1Q8IZS7 167 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 OR2L13Q8N349 312 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 TMEM178AQ8NBL3 297 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 FAM13CQ8NE31 585 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 OR8J2Q8NGG1 315 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 OR4A15Q8NGL6 344 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 OR9I1Q8NGQ6 314 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 ADIPOR1Q96A54 375 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 TMEM125Q96AQ2 219 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 SPACA9Q96E40 222 aaPredicted RBP10.69□□□□□ -0.7
CTSA-209ENST00000493522 LCORQ96JN0 433 aaPredicted RBP10.69□□□□□ -0.7
CTSA-209ENST00000493522 TEX37Q96LM6 180 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 MS4A4EQ96PG1 132 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 BARD1Q99728 777 aaKnown RBP10.69□□□□□ -0.7
CTSA-209ENST00000493522 HES7Q9BYE0 225 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 NXF5Q9H1B4 397 aaKnown RBP10.69□□□□□ -0.7
CTSA-209ENST00000493522 C3orf14Q9HBI5 128 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 SDR39U1Q9NRG7 319 aaPredicted RBP10.69□□□□□ -0.7
CTSA-209ENST00000493522 SIRT3Q9NTG7 399 aaPredicted RBP10.69□□□□□ -0.7
CTSA-209ENST00000493522 ZCCHC3Q9NUD5 404 aaKnown RBP10.69□□□□□ -0.7
CTSA-209ENST00000493522 FAM120CQ9NX05 1096 aaKnown RBP10.69□□□□□ -0.7
CTSA-209ENST00000493522 FREM3P0C091 2139 aa10.69□□□□□ -0.7
CTSA-209ENST00000493522 FRG2CA6NGY1 282 aa10.68□□□□□ -0.7
CTSA-209ENST00000493522 RNASET2O00584 256 aaKnown RBP10.68□□□□□ -0.7
CTSA-209ENST00000493522 CDK2AP1O14519 115 aa10.68□□□□□ -0.7
CTSA-209ENST00000493522 SLC22A3O75751 556 aa10.68□□□□□ -0.7
CTSA-209ENST00000493522 NEURL1O76050 574 aa10.68□□□□□ -0.7
CTSA-209ENST00000493522 CPSF4O95639 269 aaKnown RBP10.68□□□□□ -0.7
CTSA-209ENST00000493522 IL12AP29459 219 aa10.68□□□□□ -0.7
CTSA-209ENST00000493522 TMED10P49755 219 aaKnown RBP10.68□□□□□ -0.7
CTSA-209ENST00000493522 PRKAG1P54619 331 aa10.68□□□□□ -0.7
CTSA-209ENST00000493522 GYS2P54840 703 aa10.68□□□□□ -0.7
CTSA-209ENST00000493522 WNT3P56703 355 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms