RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 GPR55Q9Y2T6 319 aaPredicted RBP11.78□□□□□ -0.52
CLIP2-209ENST00000493166 FLNCQ14315 2725 aa11.78□□□□□ -0.52
CLIP2-209ENST00000493166 FLNBO75369 2602 aaKnown RBP11.77□□□□□ -0.52
CLIP2-209ENST00000493166 GTF3C1Q12789 2109 aa11.77□□□□□ -0.52
CLIP2-209ENST00000493166 A0A0G2JMM0 328 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 A0A1W2PPB8 328 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 A0A1W2PRS3 328 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 KIR3DP1A8MWS1 328 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 ZNF195O14628 629 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 TP53I11O14683 189 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 PPM1BO75688 479 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 PSMG1O95456 288 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 CT45A8P0DMV1 189 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 CT45A9P0DMV2 189 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 EDN3P14138 238 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 ZNF24P17028 368 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 GNLYP22749 145 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 RFC3P40938 356 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 UQCRFS1P47985 274 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 CLNS1AP54105 237 aaKnown RBP11.77□□□□□ -0.53
CLIP2-209ENST00000493166 PRKAG1P54619 331 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 NME5P56597 212 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 CORO7P57737 925 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 SRSF11Q05519 484 aaKnown RBP11.77□□□□□ -0.53
CLIP2-209ENST00000493166 PLCXD2Q0VAA5 305 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 ELOAQ14241 798 aaKnown RBP11.77□□□□□ -0.53
CLIP2-209ENST00000493166 ZNHIT3Q15649 155 aaPredicted RBP11.77□□□□□ -0.53
CLIP2-209ENST00000493166 LSM12Q3MHD2 195 aaKnown RBP11.77□□□□□ -0.53
CLIP2-209ENST00000493166 CT45A2Q5DJT8 189 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 ZNF324BQ6AW86 544 aaPredicted RBP11.77□□□□□ -0.53
CLIP2-209ENST00000493166 NPSR1Q6W5P4 371 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 GK5Q6ZS86 529 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 ACAD11Q709F0 780 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 SLC44A2Q8IWA5 706 aaPredicted RBP11.77□□□□□ -0.53
CLIP2-209ENST00000493166 SLC34A3Q8N130 599 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 FBXW8Q8N3Y1 598 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 ST6GALNAC3Q8NDV1 305 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 OR2M7Q8NG81 312 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 CEP70Q8NHQ1 597 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 PAQR8Q8TEZ7 354 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 OR5P2Q8WZ92 322 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 OMA1Q96E52 524 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 OR52B2Q96RD2 323 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 SLX1AQ9BQ83 275 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 FAM173AQ9BQD7 235 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 SH2D2AQ9NP31 389 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 EQTNQ9NQ60 294 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 DEPPQ9NTK1 212 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 CNIH4Q9P003 139 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 OR10H1Q9Y4A9 318 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 SNX8Q9Y5X2 465 aa11.77□□□□□ -0.53
CLIP2-209ENST00000493166 ANKUB1A6NFN9 424 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 E9PBE3 544 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 ANKRD28O15084 1053 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 TO15178 435 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 POLR3GO15318 223 aaPredicted RBP11.76□□□□□ -0.53
CLIP2-209ENST00000493166 CFLARO15519 480 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 EMC8O43402 210 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 TGDSO95455 350 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 C6orf47O95873 294 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 ABCB1P08183 1280 aaPredicted RBP11.76□□□□□ -0.53
CLIP2-209ENST00000493166 IDO1P14902 403 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 NAGAP17050 411 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 CNR1P21554 472 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 MST1P26927 711 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 IL12BP29460 328 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 KRT20P35900 424 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 KIR3DL1P43629 444 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 PSPHP78330 225 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 RPP38P78345 283 aaKnown RBP11.76□□□□□ -0.53
CLIP2-209ENST00000493166 PRR5P85299 388 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 PLGLB1Q02325 96 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 KCNC4Q03721 635 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 MRPL49Q13405 166 aaKnown RBP11.76□□□□□ -0.53
CLIP2-209ENST00000493166 DPY19L1Q2PZI1 675 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 PRAMEF20Q5VT98 475 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 OR4F3Q6IEY1 312 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 EPGNQ6UW88 154 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 RGS9BPQ6ZS82 235 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 ZFP62Q8NB50 900 aaPredicted RBP11.76□□□□□ -0.53
CLIP2-209ENST00000493166 NUP43Q8NFH3 380 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 OR8J2Q8NGG1 315 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 DIO2Q92813 273 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 TMBIM1Q969X1 311 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 TESCQ96BS2 214 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 MARK4Q96L34 752 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 MS4A4EQ96PG1 132 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 ZBTB18Q99592 522 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 TSPAN10Q9H1Z9 355 aaPredicted RBP11.76□□□□□ -0.53
CLIP2-209ENST00000493166 CLMPQ9H6B4 373 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 NEUROD4Q9HD90 331 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 SIRT3Q9NTG7 399 aaPredicted RBP11.76□□□□□ -0.53
CLIP2-209ENST00000493166 ZCCHC3Q9NUD5 404 aaKnown RBP11.76□□□□□ -0.53
CLIP2-209ENST00000493166 GPR45Q9Y5Y3 372 aa11.76□□□□□ -0.53
CLIP2-209ENST00000493166 CHCHD2Q9Y6H1 151 aaPredicted RBP11.76□□□□□ -0.53
CLIP2-209ENST00000493166 PINLYPA6NC86 204 aa11.75□□□□□ -0.53
CLIP2-209ENST00000493166 TTC36A6NLP5 189 aa11.75□□□□□ -0.53
CLIP2-209ENST00000493166 NPIPA5E9PKD4 350 aa11.75□□□□□ -0.53
CLIP2-209ENST00000493166 ACOT7O00154 380 aa11.75□□□□□ -0.53
CLIP2-209ENST00000493166 TFECO14948 347 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms