RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 PCDH7O60245 1069 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 DLX3O60479 287 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 CTAG2O75638 210 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 GOSR1O95249 250 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 CBX7O95931 251 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 CYP4B1P13584 511 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 CTSSP25774 331 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 EMDP50402 254 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 DLX5P56178 289 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 EXOSC7Q15024 291 aaKnown RBP11.37□□□□□ -0.59
COL6A1-205ENST00000492851 TRMT12Q53H54 448 aaKnown RBP11.37□□□□□ -0.59
COL6A1-205ENST00000492851 BICRALQ6AI39 1079 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 AAGABQ6PD74 315 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 SEM1Q6ZVN7 128 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 RPS27LQ71UM5 84 aaKnown RBP11.37□□□□□ -0.59
COL6A1-205ENST00000492851 CCDC116Q8IYX3 515 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 FAM83FQ8NEG4 500 aaPredicted RBP11.37□□□□□ -0.59
COL6A1-205ENST00000492851 ADCY4Q8NFM4 1077 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 TNIP2Q8NFZ5 429 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 GOT1L1Q8NHS2 421 aaPredicted RBP11.37□□□□□ -0.59
COL6A1-205ENST00000492851 HGDQ93099 445 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 L3HYPDHQ96EM0 354 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 SLC35A4Q96G79 324 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 WDYHV1Q96HA8 205 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 BTBD9Q96Q07 612 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 TRIB1Q96RU8 372 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 TM9SF2Q99805 663 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 UGT2B28Q9BY64 529 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 ACBD3Q9H3P7 528 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 SLC35C2Q9NQQ7 365 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 TAS2R9Q9NYW1 312 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 SENP1Q9P0U3 644 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 PSMC3IPQ9P2W1 217 aaPredicted RBP11.37□□□□□ -0.59
COL6A1-205ENST00000492851 SLC6A5Q9Y345 797 aa11.37□□□□□ -0.59
COL6A1-205ENST00000492851 MBD3L4A6NDZ8 208 aaPredicted RBP11.36□□□□□ -0.59
COL6A1-205ENST00000492851 MBD3L3A6NE82 208 aaPredicted RBP11.36□□□□□ -0.59
COL6A1-205ENST00000492851 PRAMEF25A6NGN4 478 aa11.36□□□□□ -0.59
COL6A1-205ENST00000492851 MBD3L5A6NJ08 208 aaPredicted RBP11.36□□□□□ -0.59
COL6A1-205ENST00000492851 PLOD3O60568 738 aa11.36□□□□□ -0.59
COL6A1-205ENST00000492851 UGT2B11O75310 529 aa11.36□□□□□ -0.59
COL6A1-205ENST00000492851 REM1O75628 298 aa11.36□□□□□ -0.59
COL6A1-205ENST00000492851 CHMP24386 653 aa11.36□□□□□ -0.59
COL6A1-205ENST00000492851 DNAJA1P31689 397 aaKnown RBP11.36□□□□□ -0.59
COL6A1-205ENST00000492851 CCT5P48643 541 aa11.36□□□□□ -0.59
COL6A1-205ENST00000492851 PNLIPRP2P54317 469 aa11.36□□□□□ -0.59
COL6A1-205ENST00000492851 NAGLUP54802 743 aa11.36□□□□□ -0.59
COL6A1-205ENST00000492851 GAB1Q13480 694 aa11.36□□□□□ -0.59
COL6A1-205ENST00000492851 DAZAP2Q15038 168 aaPredicted RBP11.36□□□□□ -0.59
COL6A1-205ENST00000492851 CEBPEQ15744 281 aa11.36□□□□□ -0.59
COL6A1-205ENST00000492851 FLYWCH1Q4VC44 716 aa11.36□□□□□ -0.59
COL6A1-205ENST00000492851 EIPR1Q53HC9 387 aa11.36□□□□□ -0.59
COL6A1-205ENST00000492851 ZNF628Q5EBL2 1059 aa11.36□□□□□ -0.59
COL6A1-205ENST00000492851 WIPI1Q5MNZ9 446 aaPredicted RBP11.36□□□□□ -0.59
COL6A1-205ENST00000492851 PLCZ1Q86YW0 608 aa11.36□□□□□ -0.59
COL6A1-205ENST00000492851 ZZZ3Q8IYH5 903 aa11.36□□□□□ -0.59
COL6A1-205ENST00000492851 CHDHQ8NE62 594 aaPredicted RBP11.36□□□□□ -0.59
COL6A1-205ENST00000492851 OR14L1PQ8NHC6 308 aa11.36□□□□□ -0.59
COL6A1-205ENST00000492851 MBD3L2Q8NHZ7 208 aaPredicted RBP11.36□□□□□ -0.59
COL6A1-205ENST00000492851 FAM76AQ8TAV0 307 aa11.36□□□□□ -0.59
COL6A1-205ENST00000492851 METTL2AQ96IZ6 378 aaKnown RBP11.36□□□□□ -0.59
COL6A1-205ENST00000492851 TMEM237Q96Q45 408 aa11.36□□□□□ -0.59
COL6A1-205ENST00000492851 UCN2Q96RP3 112 aa11.36□□□□□ -0.59
COL6A1-205ENST00000492851 NODALQ96S42 347 aa11.36□□□□□ -0.59
COL6A1-205ENST00000492851 POLDIP3Q9BY77 421 aaKnown RBP11.36□□□□□ -0.59
COL6A1-205ENST00000492851 PPCSQ9HAB8 311 aa11.36□□□□□ -0.59
COL6A1-205ENST00000492851 SDHAF3Q9NRP4 125 aa11.36□□□□□ -0.59
COL6A1-205ENST00000492851 MRTO4Q9UKD2 239 aaKnown RBP11.36□□□□□ -0.59
COL6A1-205ENST00000492851 GRID1Q9ULK0 1009 aa11.36□□□□□ -0.59
COL6A1-205ENST00000492851 DTX4Q9Y2E6 619 aa11.36□□□□□ -0.59
COL6A1-205ENST00000492851 PHF3Q92576 2039 aaKnown RBP11.36□□□□□ -0.59
COL6A1-205ENST00000492851 FAM221AA4D161 298 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 TUBAL3A6NHL2 446 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 COQ9O75208 318 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 ERN1O75460 977 aaKnown RBP11.35□□□□□ -0.59
COL6A1-205ENST00000492851 IL3P08700 152 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 ANXA4P09525 319 aaPredicted RBP11.35□□□□□ -0.59
COL6A1-205ENST00000492851 PCSK2P16519 638 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 GCAP28676 217 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 IL12BP29460 328 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 SRD5A2P31213 254 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 TIA1P31483 386 aaKnown RBP eCLIP11.35□□□□□ -0.59
COL6A1-205ENST00000492851 ART1P52961 327 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 MRPS35P82673 323 aaKnown RBP11.35□□□□□ -0.59
COL6A1-205ENST00000492851 SORDQ00796 357 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 HMGCS1Q01581 520 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 SLC29A2Q14542 456 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 NNATQ16517 81 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 BCL2A1Q16548 175 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 IMPG1Q17R60 797 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 CCDC153Q494R4 210 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 SPDYAQ5MJ70 313 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 YRDCQ86U90 279 aaKnown RBP11.35□□□□□ -0.59
COL6A1-205ENST00000492851 IFNEQ86WN2 208 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 FAM9CQ8IZT9 166 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 C16orf78Q8WTQ4 265 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 TMBIM1Q969X1 311 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 EXOSC8Q96B26 276 aaKnown RBP11.35□□□□□ -0.59
COL6A1-205ENST00000492851 BBS4Q96RK4 519 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 ADOQ96SZ5 270 aa11.35□□□□□ -0.59
COL6A1-205ENST00000492851 HBEGFQ99075 208 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms