RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 GPR45Q9Y5Y3 372 aa10.22□□□□□ -0.77
CPSF7-212ENST00000489728 GOLGA8QA0A0J9YX86 632 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 GOLGA8OA6NCC3 632 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 GOLGA8NF8WBI6 632 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 EMC8O43402 210 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 ZNF354AO60765 605 aaPredicted RBP10.21□□□□□ -0.77
CPSF7-212ENST00000489728 PPM1BO75688 479 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 P04436 131 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 KRT16P08779 473 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 EDN3P14138 238 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 CNR1P21554 472 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 PTGER1P34995 402 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 IDH3AP50213 366 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 MLLT10P55197 1068 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 PLCXD2Q0VAA5 305 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 ZNF155Q12901 538 aaPredicted RBP10.21□□□□□ -0.77
CPSF7-212ENST00000489728 SNTA1Q13424 505 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 MAPKAPK3Q16644 382 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 CYP27C1Q4G0S4 372 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 SLC22A10Q63ZE4 541 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 NXNQ6DKJ4 435 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 MSANTD1Q6ZTZ1 278 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 FAM47EQ6ZV65 393 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 NUP54Q7Z3B4 507 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 MDGA2Q7Z553 956 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 SLC34A3Q8N130 599 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 CDRT4Q8N9R6 151 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 OR56A1Q8NGH5 318 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 DOK4Q8TEW6 326 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 NR4A3Q92570 626 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 SLC35A4Q96G79 324 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 TAAR6Q96RI8 345 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 FAM173AQ9BQD7 235 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 Q9N2J8 555 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 KLHL1Q9NR64 748 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 OLAHQ9NV23 265 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 MRGBPQ9NV56 204 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 ASF1BQ9NVP2 202 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 GIN1Q9NXP7 522 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 MAP10Q9P2G4 905 aa10.21□□□□□ -0.77
CPSF7-212ENST00000489728 MRTO4Q9UKD2 239 aaKnown RBP10.21□□□□□ -0.77
CPSF7-212ENST00000489728 CHCHD2Q9Y6H1 151 aaPredicted RBP10.21□□□□□ -0.77
CPSF7-212ENST00000489728 EXPH5Q8NEV8 1989 aa10.21□□□□□ -0.78
CPSF7-212ENST00000489728 PRSS51A0A1B0GVH4 220 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 OR6C70A6NIJ9 312 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 PEX1O43933 1283 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 SNX4O95219 450 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 IL6P05231 212 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 CT45A8P0DMV1 189 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 CT45A9P0DMV2 189 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 LCN1P31025 176 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 S100A3P33764 101 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 KRT20P35900 424 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 MAP3K8P41279 467 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 PRIM2P49643 509 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 CDK9P50750 372 aaKnown RBP10.2□□□□□ -0.78
CPSF7-212ENST00000489728 ATP4BP51164 291 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 AQP5P55064 265 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 STX1BP61266 288 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 PSG6Q00889 435 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 EFR3AQ14156 821 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 HYAL4Q2M3T9 481 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 PGS1Q32NB8 556 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 PRR30Q53SZ7 412 aaPredicted RBP10.2□□□□□ -0.78
CPSF7-212ENST00000489728 CT45A2Q5DJT8 189 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 MFSD12Q6NUT3 480 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 SULF2Q8IWU5 870 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 MIER2Q8N344 545 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 ST6GALNAC3Q8NDV1 305 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 SIMC1Q8NDZ2 872 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 FAM13CQ8NE31 585 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 NUP43Q8NFH3 380 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 OMA1Q96E52 524 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 OR52B2Q96RD2 323 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 HES7Q9BYE0 225 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 HHATLQ9HCP6 504 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 SIRT3Q9NTG7 399 aaPredicted RBP10.2□□□□□ -0.78
CPSF7-212ENST00000489728 BTNL2Q9UIR0 455 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 VPS4AQ9UN37 437 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 PCDHGB4Q9UN71 923 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 NTNG1Q9Y2I2 539 aa10.2□□□□□ -0.78
CPSF7-212ENST00000489728 SHANK1Q9Y566 2161 aa10.19□□□□□ -0.78
CPSF7-212ENST00000489728 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.19□□□□□ -0.78
CPSF7-212ENST00000489728 ACOT7O00154 380 aa10.19□□□□□ -0.78
CPSF7-212ENST00000489728 SCN2BO60939 215 aa10.19□□□□□ -0.78
CPSF7-212ENST00000489728 SLC22A3O75751 556 aa10.19□□□□□ -0.78
CPSF7-212ENST00000489728 NKX2-2O95096 273 aa10.19□□□□□ -0.78
CPSF7-212ENST00000489728 C6orf47O95873 294 aa10.19□□□□□ -0.78
CPSF7-212ENST00000489728 PGRP06401 933 aa10.19□□□□□ -0.78
CPSF7-212ENST00000489728 ABCB1P08183 1280 aaPredicted RBP10.19□□□□□ -0.78
CPSF7-212ENST00000489728 TROVE2P10155 538 aaKnown RBP eCLIP10.19□□□□□ -0.78
CPSF7-212ENST00000489728 ZNF24P17028 368 aa10.19□□□□□ -0.78
CPSF7-212ENST00000489728 MAGEA8P43361 318 aa10.19□□□□□ -0.78
CPSF7-212ENST00000489728 CCT3P49368 545 aaKnown RBP10.19□□□□□ -0.78
CPSF7-212ENST00000489728 MEOX1P50221 254 aa10.19□□□□□ -0.78
CPSF7-212ENST00000489728 TDGF1P3P51864 188 aa10.19□□□□□ -0.78
CPSF7-212ENST00000489728 PNLIPRP2P54317 469 aa10.19□□□□□ -0.78
CPSF7-212ENST00000489728 PSMD4P55036 377 aaKnown RBP10.19□□□□□ -0.78
CPSF7-212ENST00000489728 WNT3P56703 355 aa10.19□□□□□ -0.78
CPSF7-212ENST00000489728 HBA1P69905 142 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms