RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 C1QCP02747 245 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 PGRP06401 933 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 COX7A2P14406 83 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 EFNA1P20827 205 aaPredicted RBP9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 NME2P22392 152 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 MST1P26927 711 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 TLX1P31314 330 aaPredicted RBP9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 HPCAL1P37235 193 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 BUD31P41223 144 aaPredicted RBP9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 ALDH9A1P49189 494 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 KCNK10P57789 538 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 PMP22Q01453 160 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 ALDH6A1Q02252 535 aaKnown RBP9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 SRSF11Q05519 484 aaKnown RBP9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 RBPJQ06330 500 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 STX5Q13190 355 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 MAPKAPK3Q16644 382 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 DPY19L1Q2PZI1 675 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 KRTCAP3Q53RY4 240 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 ZNF468Q5VIY5 522 aaPredicted RBP9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 OR52E8Q6IFG1 317 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 C8orf82Q6P1X6 216 aaPredicted RBP9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 SLC2A7Q6PXP3 512 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 C16orf89Q6UX73 402 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 MAMDC2Q7Z304 686 aaPredicted RBP9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 GALNTL5Q7Z4T8 443 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 MSRB3Q8IXL7 192 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 GPALPP1Q8IXQ4 340 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 CLECL1Q8IZS7 167 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 TMEM156Q8N614 296 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 THAP3Q8WTV1 239 aaPredicted RBP9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 GTF2H4Q92759 462 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 TANKQ92844 425 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 PPCDCQ96CD2 204 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 FRMD6Q96NE9 622 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 DUSP26Q9BV47 211 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 FAIM2Q9BWQ8 316 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 HES7Q9BYE0 225 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 BHLHE41Q9C0J9 482 aaPredicted RBP9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 RPF2Q9H7B2 306 aaKnown RBP9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 SLC6A13Q9NSD5 602 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 SLAMF8Q9P0V8 285 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 ZNF223Q9UK11 482 aaPredicted RBP9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 MAPRE3Q9UPY8 281 aa9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 KLF13Q9Y2Y9 288 aaPredicted RBP9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 YARS2Q9Y2Z4 477 aaKnown RBP9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 SPTBN1Q01082 2364 aaKnown RBP9.78□□□□□ -0.84
SCAMP4-208ENST00000489554 COL12A1Q99715 3063 aa9.77□□□□□ -0.84
SCAMP4-208ENST00000489554 DOPEY1Q5JWR5 2465 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 CYSRT1A8MQ03 144 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 C17orf105B2RV13 164 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 DYRK3O43781 588 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 LDB3O75112 727 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 GUCY1B2O75343 617 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 ITGA10O75578 1167 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 IL6P05231 212 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 KRT16P08779 473 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 TNNI3P19429 210 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 CPOXP36551 454 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 PGM1P36871 562 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 RPL3P39023 403 aaKnown RBP9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 CDKN2CP42773 168 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 KIR3DL1P43629 444 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 STT3AP46977 705 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 CPA2P48052 419 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 ST13P50502 369 aaKnown RBP9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 SSR4P51571 173 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 KCNJ2P63252 427 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 ID2Q02363 134 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 FOLH1Q04609 750 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 CYLC2Q14093 348 aaPredicted RBP9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 PGS1Q32NB8 556 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 COQ5Q5HYK3 327 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 CPTPQ5TA50 214 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 FBXW10Q5XX13 1052 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 REP15Q6BDI9 236 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 DLEU7Q6UYE1 221 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 HSDL2Q6YN16 418 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 DGAT2L6Q6ZPD8 337 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 MSANTD1Q6ZTZ1 278 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 R3HCC1LQ7Z5L2 792 aaKnown RBP9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 ZNF227Q86WZ6 799 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 OR4N5Q8IXE1 308 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 CYP4Z2PQ8N1L4 340 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 DPP10Q8N608 796 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 POGLUT1Q8NBL1 392 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 OR8K3Q8NH51 312 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 GOT1L1Q8NHS2 421 aaPredicted RBP9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 PTPMT1Q8WUK0 201 aaPredicted RBP9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 RELTQ969Z4 430 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 EXOSC8Q96B26 276 aaKnown RBP9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 RCN3Q96D15 328 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 GPR137Q96N19 417 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 CCDC115Q96NT0 180 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 DGAT2Q96PD7 388 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 INPP5KQ9BT40 448 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 PAIP1Q9H074 479 aaKnown RBP9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 GLIPR2Q9H4G4 154 aa9.77□□□□□ -0.85
SCAMP4-208ENST00000489554 MIEF1Q9NQG6 463 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms