RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 PSME2Q9UL46 239 aa8.52□□□□□ -1.05
SNX17-207ENST00000489402 PYCARDQ9ULZ3 195 aa8.52□□□□□ -1.05
SNX17-207ENST00000489402 SLC12A4Q9UP95 1085 aa8.52□□□□□ -1.05
SNX17-207ENST00000489402 EXO1Q9UQ84 846 aaKnown RBP8.52□□□□□ -1.05
SNX17-207ENST00000489402 DTX4Q9Y2E6 619 aa8.52□□□□□ -1.05
SNX17-207ENST00000489402 PCDHA9Q9Y5H5 950 aa8.52□□□□□ -1.05
SNX17-207ENST00000489402 MED12Q93074 2177 aa8.52□□□□□ -1.05
SNX17-207ENST00000489402 FRG2CA6NGY1 282 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 FAM171A2A8MVW0 826 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 STX16-NPEPL1H3BU86 382 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 STX16O14662 325 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 SMIM24O75264 130 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 UGT2B11O75310 529 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 NME6O75414 186 aaPredicted RBP8.51□□□□□ -1.05
SNX17-207ENST00000489402 REM1O75628 298 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 CD53P19397 219 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 S1PR1P21453 382 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 DRD5P21918 477 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 HOXC12P31275 282 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 PHBP35232 272 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 KRT20P35900 424 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 CPOXP36551 454 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 FEN1P39748 380 aaKnown RBP8.51□□□□□ -1.05
SNX17-207ENST00000489402 PPICP45877 212 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 ALDH9A1P49189 494 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 NKX6-1P78426 367 aaPredicted RBP8.51□□□□□ -1.05
SNX17-207ENST00000489402 FOXF2Q12947 444 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 TRAF3Q13114 568 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 GGTA1PQ4G0N0 100 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 SGO1Q5FBB7 561 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 TECRLQ5HYJ1 363 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 FAM111BQ6SJ93 734 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 CLEC9AQ6UXN8 241 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 Q71RC1 249 aaPredicted RBP8.51□□□□□ -1.05
SNX17-207ENST00000489402 TAOK1Q7L7X3 1001 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 CHMP1BQ7LBR1 199 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 COMMD6Q7Z4G1 85 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 MILR1Q7Z6M3 343 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 PLCZ1Q86YW0 608 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 GRAMD2AQ8IUY3 354 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 P3H2Q8IVL5 708 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 GCNT2Q8N0V5 402 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 METTL4Q8N3J2 472 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 OR52R1Q8NGF1 315 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 SLC44A1Q8WWI5 657 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 SFXN2Q96NB2 322 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 GPR78Q96P69 363 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 UCN2Q96RP3 112 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 SMR3AQ99954 134 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 FAIM2Q9BWQ8 316 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 GRPEL1Q9HAV7 217 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 PFDN4Q9NQP4 134 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 NMRK1Q9NWW6 199 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 TAS2R10Q9NYW0 307 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 EHD3Q9NZN3 535 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 DKKL1Q9UK85 242 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 PCTPQ9UKL6 214 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 PLLPQ9Y342 182 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 ZNF780BQ9Y6R6 833 aa8.51□□□□□ -1.05
SNX17-207ENST00000489402 FLNAP21333 2647 aaKnown RBP8.51□□□□□ -1.05
SNX17-207ENST00000489402 ANK3Q12955 4377 aaKnown RBP8.5□□□□□ -1.05
SNX17-207ENST00000489402 A0A1B0GTL3 188 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 A0A1W2PPR1 153 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 OR6C70A6NIJ9 312 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 C17orf51A8MQB3 221 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 PLOD2O00469 737 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 BCAS2O75934 225 aaPredicted RBP8.5□□□□□ -1.05
SNX17-207ENST00000489402 ESRRBO95718 433 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 OTCP00480 354 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 ALDOAP04075 364 aaKnown RBP8.5□□□□□ -1.05
SNX17-207ENST00000489402 IL12BP29460 328 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 SRD5A2P31213 254 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 PTGDSP41222 190 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 TRA2BP62995 288 aaKnown RBP8.5□□□□□ -1.05
SNX17-207ENST00000489402 PSPHP78330 225 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 DUSP2Q05923 314 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 MGAT2Q10469 447 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 TSNAXIP1Q2TAA8 658 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 TRMT12Q53H54 448 aaKnown RBP8.5□□□□□ -1.05
SNX17-207ENST00000489402 FAM180BQ6P0A1 224 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 ZDHHC24Q6UX98 284 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 RPS27LQ71UM5 84 aaKnown RBP8.5□□□□□ -1.05
SNX17-207ENST00000489402 P4HA3Q7Z4N8 544 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 ADGRE4PQ86SQ3 457 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 C17orf53Q8N3J3 647 aaPredicted RBP8.5□□□□□ -1.05
SNX17-207ENST00000489402 GBP7Q8N8V2 638 aaPredicted RBP8.5□□□□□ -1.05
SNX17-207ENST00000489402 WDSUB1Q8N9V3 476 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 OR4F6Q8NGB9 312 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 SELENOMQ8WWX9 145 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 PIGTQ969N2 578 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 CTHRC1Q96CG8 243 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 NSUN5Q96P11 429 aaKnown RBP8.5□□□□□ -1.05
SNX17-207ENST00000489402 COL21A1Q96P44 957 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 LRRC1Q9BTT6 524 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 ZNF395Q9H8N7 513 aaPredicted RBP8.5□□□□□ -1.05
SNX17-207ENST00000489402 BRF2Q9HAW0 419 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 ZNF226Q9NYT6 803 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 CLCF1Q9UBD9 225 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 ZNF639Q9UID6 485 aa8.5□□□□□ -1.05
SNX17-207ENST00000489402 CES1P1Q9UKY3 287 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms