RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 NXNL1Q96CM4 212 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 NODALQ96S42 347 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 POTEKPQ9BYX7 375 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 BPESC1Q9GZL8 116 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 IL22Q9GZX6 179 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 HSD3B7Q9H2F3 369 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 UNKLQ9H9P5 680 aaKnown RBP10.24□□□□□ -0.77
HDAC6-233ENST00000489352 GLRX2Q9NS18 164 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 DDX28Q9NUL7 540 aaKnown RBP10.24□□□□□ -0.77
HDAC6-233ENST00000489352 BFARQ9NZS9 450 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 STOML1Q9UBI4 398 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 DMGDHQ9UI17 866 aaKnown RBP10.24□□□□□ -0.77
HDAC6-233ENST00000489352 FBXL2Q9UKC9 423 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 MGAT4BQ9UQ53 548 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 NPIPA5A0A0B4J1W7 369 aa10.23□□□□□ -0.77
HDAC6-233ENST00000489352 ESPNB1AK53 854 aa10.23□□□□□ -0.77
HDAC6-233ENST00000489352 E7EQL1 145 aa10.23□□□□□ -0.77
HDAC6-233ENST00000489352 NPIPA7E9PJI5 369 aa10.23□□□□□ -0.77
HDAC6-233ENST00000489352 SS18L1O75177 396 aaPredicted RBP10.23□□□□□ -0.77
HDAC6-233ENST00000489352 CLEC3AO75596 197 aa10.23□□□□□ -0.77
HDAC6-233ENST00000489352 BCL10O95999 233 aa10.23□□□□□ -0.77
HDAC6-233ENST00000489352 NPIPA8P0DM63 369 aa10.23□□□□□ -0.77
HDAC6-233ENST00000489352 HKR1P10072 659 aa10.23□□□□□ -0.77
HDAC6-233ENST00000489352 EPHA1P21709 976 aa10.23□□□□□ -0.77
HDAC6-233ENST00000489352 CNTFP26441 200 aa10.23□□□□□ -0.77
HDAC6-233ENST00000489352 SUCLG1P53597 346 aaKnown RBP10.23□□□□□ -0.77
HDAC6-233ENST00000489352 GDF10P55107 478 aa10.23□□□□□ -0.77
HDAC6-233ENST00000489352 PPA1Q15181 289 aa10.23□□□□□ -0.77
HDAC6-233ENST00000489352 C6orf163Q5TEZ5 329 aa10.23□□□□□ -0.77
HDAC6-233ENST00000489352 CENPUQ71F23 418 aa10.23□□□□□ -0.77
HDAC6-233ENST00000489352 SPNS2Q8IVW8 549 aa10.23□□□□□ -0.77
HDAC6-233ENST00000489352 TEX29Q8N6K0 151 aa10.23□□□□□ -0.77
HDAC6-233ENST00000489352 OR4K17Q8NGC6 315 aa10.23□□□□□ -0.77
HDAC6-233ENST00000489352 CD200R1Q8TD46 325 aa10.23□□□□□ -0.77
HDAC6-233ENST00000489352 TMCO6Q96DC7 493 aa10.23□□□□□ -0.77
HDAC6-233ENST00000489352 MFSD3Q96ES6 412 aa10.23□□□□□ -0.77
HDAC6-233ENST00000489352 VPS39Q96JC1 886 aa10.23□□□□□ -0.77
HDAC6-233ENST00000489352 GOLPH3Q9H4A6 298 aa10.23□□□□□ -0.77
HDAC6-233ENST00000489352 PRDM7Q9NQW5 492 aa10.23□□□□□ -0.77
HDAC6-233ENST00000489352 MCTS1Q9ULC4 181 aaKnown RBP10.23□□□□□ -0.77
HDAC6-233ENST00000489352 CAPN11Q9UMQ6 739 aa10.23□□□□□ -0.77
HDAC6-233ENST00000489352 ZNF337Q9Y3M9 751 aa10.23□□□□□ -0.77
HDAC6-233ENST00000489352 COMMD10Q9Y6G5 202 aa10.23□□□□□ -0.77
HDAC6-233ENST00000489352 ARFGEF3Q5TH69 2177 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 POM121CA8CG34 1229 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 AP3B1O00203 1094 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 ZIC3O60481 467 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 SYNGR4O95473 234 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 TUBBP07437 444 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 C1GALT1C1LP0DN25 315 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 GNAZP19086 355 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 TPSB2P20231 275 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 MGAT1P26572 445 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 SSTR4P31391 388 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 NPY2RP49146 381 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 CDH15P55291 814 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 DSCR4P56555 118 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-233ENST00000489352 P2RY6Q15077 328 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 TPSAB1Q15661 275 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 AP5B1Q2VPB7 878 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 GTF2IRD2BQ6EKJ0 949 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 NEPROQ6NW34 567 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 ZNF544Q6NX49 715 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 TMEM108Q6UXF1 575 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 Q6ZSR9 355 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 GTF2IRD2Q86UP8 949 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 GBP7Q8N8V2 638 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-233ENST00000489352 ACOT4Q8N9L9 421 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 FBXL8Q96CD0 374 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 IQCDQ96DY2 449 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 NAP1L5Q96NT1 182 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-233ENST00000489352 F2RL3Q96RI0 385 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 TBCDQ9BTW9 1192 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 CDC42EP4Q9H3Q1 356 aaKnown RBP10.22□□□□□ -0.77
HDAC6-233ENST00000489352 RAB6BQ9NRW1 208 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 MS4A12Q9NXJ0 267 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 ING1Q9UK53 422 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-233ENST00000489352 SLC22A14Q9Y267 594 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 GRIP1Q9Y3R0 1128 aa10.22□□□□□ -0.77
HDAC6-233ENST00000489352 A0A1B0GTH6 734 aa10.21□□□□□ -0.77
HDAC6-233ENST00000489352 PIN1P1O15428 100 aa10.21□□□□□ -0.77
HDAC6-233ENST00000489352 ADAP00813 363 aa10.21□□□□□ -0.77
HDAC6-233ENST00000489352 EPB42P16452 691 aa10.21□□□□□ -0.77
HDAC6-233ENST00000489352 HK1P19367 917 aa10.21□□□□□ -0.77
HDAC6-233ENST00000489352 ARNTP27540 789 aa10.21□□□□□ -0.77
HDAC6-233ENST00000489352 PTGDSP41222 190 aa10.21□□□□□ -0.77
HDAC6-233ENST00000489352 EIF1AXP47813 144 aaKnown RBP10.21□□□□□ -0.77
HDAC6-233ENST00000489352 CLDN20P56880 219 aa10.21□□□□□ -0.77
HDAC6-233ENST00000489352 B3GALT5-AS1P59052 145 aa10.21□□□□□ -0.77
HDAC6-233ENST00000489352 PHC1P78364 1004 aa10.21□□□□□ -0.77
HDAC6-233ENST00000489352 HMGCS1Q01581 520 aa10.21□□□□□ -0.77
HDAC6-233ENST00000489352 PLCXD2Q0VAA5 305 aa10.21□□□□□ -0.77
HDAC6-233ENST00000489352 THOC5Q13769 683 aaKnown RBP10.21□□□□□ -0.77
HDAC6-233ENST00000489352 SLBPQ14493 270 aaKnown RBP eCLIP10.21□□□□□ -0.77
HDAC6-233ENST00000489352 NNATQ16517 81 aa10.21□□□□□ -0.77
HDAC6-233ENST00000489352 STX1AQ16623 288 aa10.21□□□□□ -0.77
HDAC6-233ENST00000489352 ADPRMQ3LIE5 342 aa10.21□□□□□ -0.77
HDAC6-233ENST00000489352 ZNF470Q6ECI4 717 aa10.21□□□□□ -0.77
HDAC6-233ENST00000489352 DESI1Q6ICB0 168 aa10.21□□□□□ -0.77
HDAC6-233ENST00000489352 BHLHA15Q7RTS1 189 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms