RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 ZNF639Q9UID6 485 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 RIMS3Q9UJD0 308 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 C3orf18Q9UK00 162 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 PCDHGA8Q9Y5G5 932 aa9.34□□□□□ -0.91
USP11-211ENST00000489111 HEMK1Q9Y5R4 338 aaPredicted RBP9.34□□□□□ -0.91
USP11-211ENST00000489111 GOLGA4Q13439 2230 aaKnown RBP9.33□□□□□ -0.92
USP11-211ENST00000489111 ARID1BQ8NFD5 2236 aaPredicted RBP9.33□□□□□ -0.92
USP11-211ENST00000489111 A0A0G2JPF8 293 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 SPAARA0A1B0GVQ0 90 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 TTC36A6NLP5 189 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 A8MVJ9 347 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 HNRNPCL2B2RXH8 293 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 HNRNPCL3B7ZW38 293 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 PROB1E7EW31 1015 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 M0QX08 132 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 ALOX12BO75342 701 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 DEAF1O75398 565 aaPredicted RBP9.33□□□□□ -0.92
USP11-211ENST00000489111 NME6O75414 186 aaPredicted RBP9.33□□□□□ -0.92
USP11-211ENST00000489111 STK17BO94768 372 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 H6PDO95479 791 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 FABP3P05413 133 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 CHRM4P08173 479 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 FTH1P19P0C7X4 201 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 HNRNPCL4P0DMR1 293 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 S1PR1P21453 382 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 SLC5A2P31639 672 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 SOX18P35713 384 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 ETV5P41161 510 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 EMP2P54851 167 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 POU6F2P78424 691 aaPredicted RBP9.33□□□□□ -0.92
USP11-211ENST00000489111 FUT5Q11128 374 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 FUT7Q11130 342 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 ATP6AP1Q15904 470 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 NKG7Q16617 165 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 GRAMD1BQ3KR37 738 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 IFI44LQ53G44 452 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 DCST2Q5T1A1 773 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 TMEM164Q5U3C3 297 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 FAAH2Q6GMR7 532 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 RNF111Q6ZNA4 994 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 PACS2Q86VP3 889 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 ZDHHC21Q8IVQ6 265 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 LILRA2Q8N149 483 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 GALNT6Q8NCL4 622 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 PLPP5Q8NEB5 264 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 OR10Q1Q8NGQ4 319 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 WDR36Q8NI36 951 aaKnown RBP9.33□□□□□ -0.92
USP11-211ENST00000489111 FAM110BQ8TC76 370 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 SPPL2AQ8TCT8 520 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 PTPMT1Q8WUK0 201 aaPredicted RBP9.33□□□□□ -0.92
USP11-211ENST00000489111 RASSF5Q8WWW0 418 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 GEMIN6Q8WXD5 167 aaKnown RBP9.33□□□□□ -0.92
USP11-211ENST00000489111 PROX1Q92786 737 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 SLC35A4Q96G79 324 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 TACO1Q9BSH4 297 aaKnown RBP9.33□□□□□ -0.92
USP11-211ENST00000489111 DOHHQ9BU89 302 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 BTBD2Q9BX70 525 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 OR8D2Q9GZM6 311 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 OR10A5Q9H207 317 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 PIGUQ9H490 435 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 BCL2L10Q9HD36 194 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 Q9N2J8 555 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 AGPAT4Q9NRZ5 378 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 SEC14L3Q9UDX4 400 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 C19orf25Q9UFG5 118 aaPredicted RBP9.33□□□□□ -0.92
USP11-211ENST00000489111 SLC13A4Q9UKG4 626 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 SATB2Q9UPW6 733 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 CFL2Q9Y281 166 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 B3GALT1Q9Y5Z6 326 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 KCNE3Q9Y6H6 103 aa9.33□□□□□ -0.92
USP11-211ENST00000489111 MDC1Q14676 2089 aaKnown RBP9.32□□□□□ -0.92
USP11-211ENST00000489111 VPS13AQ96RL7 3174 aa9.32□□□□□ -0.92
USP11-211ENST00000489111 VSTM2BA6NLU5 285 aa9.32□□□□□ -0.92
USP11-211ENST00000489111 HRKO00198 91 aa9.32□□□□□ -0.92
USP11-211ENST00000489111 GNGT2O14610 69 aa9.32□□□□□ -0.92
USP11-211ENST00000489111 CASQ2O14958 399 aaPredicted RBP9.32□□□□□ -0.92
USP11-211ENST00000489111 CLOCKO15516 846 aa9.32□□□□□ -0.92
USP11-211ENST00000489111 BRINP1O60477 761 aa9.32□□□□□ -0.92
USP11-211ENST00000489111 GCM2O75603 506 aaPredicted RBP9.32□□□□□ -0.92
USP11-211ENST00000489111 RECKO95980 971 aa9.32□□□□□ -0.92
USP11-211ENST00000489111 ALPPP05187 535 aa9.32□□□□□ -0.92
USP11-211ENST00000489111 CCNYL3P0C7X3 344 aa9.32□□□□□ -0.92
USP11-211ENST00000489111 ETS2P15036 469 aa9.32□□□□□ -0.92
USP11-211ENST00000489111 ATP6V1C1P21283 382 aa9.32□□□□□ -0.92
USP11-211ENST00000489111 CSRP1P21291 193 aaKnown RBP9.32□□□□□ -0.92
USP11-211ENST00000489111 PEX2P28328 305 aa9.32□□□□□ -0.92
USP11-211ENST00000489111 GABRA3P34903 492 aa9.32□□□□□ -0.92
USP11-211ENST00000489111 GCKP35557 465 aa9.32□□□□□ -0.92
USP11-211ENST00000489111 EMDP50402 254 aa9.32□□□□□ -0.92
USP11-211ENST00000489111 SELENOWP63302 87 aa9.32□□□□□ -0.92
USP11-211ENST00000489111 DUSP8Q13202 625 aa9.32□□□□□ -0.92
USP11-211ENST00000489111 NCF4Q15080 339 aa9.32□□□□□ -0.92
USP11-211ENST00000489111 MAPK11Q15759 364 aa9.32□□□□□ -0.92
USP11-211ENST00000489111 ARHGAP11BQ3KRB8 267 aa9.32□□□□□ -0.92
USP11-211ENST00000489111 SFT2D3Q587I9 215 aa9.32□□□□□ -0.92
USP11-211ENST00000489111 C3orf38Q5JPI3 329 aa9.32□□□□□ -0.92
USP11-211ENST00000489111 HEPHL1Q6MZM0 1159 aa9.32□□□□□ -0.92
USP11-211ENST00000489111 FAM198BQ6UWH4 519 aa9.32□□□□□ -0.92
USP11-211ENST00000489111 C6orf15Q6UXA7 325 aaPredicted RBP9.32□□□□□ -0.92
USP11-211ENST00000489111 LANCL3Q6ZV70 420 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms