RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 SDR39U1Q9NRG7 319 aaPredicted RBP17.18■□□□□ 0.34
PTCD3-217ENST00000488801 DDX18Q9NVP1 670 aaKnown RBP17.18■□□□□ 0.34
PTCD3-217ENST00000488801 TAS2R9Q9NYW1 312 aa17.18■□□□□ 0.34
PTCD3-217ENST00000488801 ERVK-11Q9UQG0 969 aa17.18■□□□□ 0.34
PTCD3-217ENST00000488801 NPFFR2Q9Y5X5 522 aa17.18■□□□□ 0.34
PTCD3-217ENST00000488801 COPG1Q9Y678 874 aaKnown RBP17.18■□□□□ 0.34
PTCD3-217ENST00000488801 ARHGAP21Q5T5U3 1957 aa17.18■□□□□ 0.34
PTCD3-217ENST00000488801 A0A0G2JMM0 328 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 A0A1W2PPB8 328 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 A0A1W2PRS3 328 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 KIR3DP1A8MWS1 328 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 E9PBE3 544 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 RNASET2O00584 256 aaKnown RBP17.17■□□□□ 0.34
PTCD3-217ENST00000488801 ERN1O75460 977 aaKnown RBP17.17■□□□□ 0.34
PTCD3-217ENST00000488801 RASAL1O95294 804 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 CCL3P10147 92 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 IDO1P14902 403 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 NAGAP17050 411 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 EFNA1P20827 205 aaPredicted RBP17.17■□□□□ 0.34
PTCD3-217ENST00000488801 IL12AP29459 219 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 IDH3AP50213 366 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 CORO7P57737 925 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 UFM1P61960 85 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 PSPHP78330 225 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 RPS6KA2Q15349 733 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 NNATQ16517 81 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 GSTA3Q16772 222 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 TMEM81Q6P7N7 255 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 TMEM64Q6YI46 380 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 HEATR5AQ86XA9 2040 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 FBXW8Q8N3Y1 598 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 BCORP1Q8N888 145 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 ZFP62Q8NB50 900 aaPredicted RBP17.17■□□□□ 0.34
PTCD3-217ENST00000488801 DNAJB8Q8NHS0 232 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 RNF138Q8WVD3 245 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 OR5P2Q8WZ92 322 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 NR4A3Q92570 626 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 FAM120BQ96EK7 910 aaKnown RBP17.17■□□□□ 0.34
PTCD3-217ENST00000488801 CCDC28BQ9BUN5 200 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 PROK2Q9HC23 129 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 TCF7L2Q9NQB0 619 aa17.17■□□□□ 0.34
PTCD3-217ENST00000488801 CNOT11Q9UKZ1 510 aaKnown RBP17.17■□□□□ 0.34
PTCD3-217ENST00000488801 PHF3Q92576 2039 aaKnown RBP17.16■□□□□ 0.34
PTCD3-217ENST00000488801 A0A1W2PRB8 838 aa17.16■□□□□ 0.34
PTCD3-217ENST00000488801 DYNC1I1O14576 645 aa17.16■□□□□ 0.34
PTCD3-217ENST00000488801 DIAPH2O60879 1101 aa17.16■□□□□ 0.34
PTCD3-217ENST00000488801 PPM1BO75688 479 aa17.16■□□□□ 0.34
PTCD3-217ENST00000488801 KIR3DL1P43629 444 aa17.16■□□□□ 0.34
PTCD3-217ENST00000488801 TMED10P49755 219 aaKnown RBP17.16■□□□□ 0.34
PTCD3-217ENST00000488801 NRG3P56975 720 aa17.16■□□□□ 0.34
PTCD3-217ENST00000488801 SRSF11Q05519 484 aaKnown RBP17.16■□□□□ 0.34
PTCD3-217ENST00000488801 MAPKAPK3Q16644 382 aa17.16■□□□□ 0.34
PTCD3-217ENST00000488801 SPANXN4Q5MJ08 99 aa17.16■□□□□ 0.34
PTCD3-217ENST00000488801 OR4F3Q6IEY1 312 aa17.16■□□□□ 0.34
PTCD3-217ENST00000488801 FAM180AQ6UWF9 173 aa17.16■□□□□ 0.34
PTCD3-217ENST00000488801 SIAH3Q8IW03 269 aa17.16■□□□□ 0.34
PTCD3-217ENST00000488801 SULF2Q8IWU5 870 aa17.16■□□□□ 0.34
PTCD3-217ENST00000488801 SLC34A3Q8N130 599 aa17.16■□□□□ 0.34
PTCD3-217ENST00000488801 CPSF7Q8N684 471 aaKnown RBP17.16■□□□□ 0.34
PTCD3-217ENST00000488801 GALNT11Q8NCW6 608 aa17.16■□□□□ 0.34
PTCD3-217ENST00000488801 OR10G3Q8NGC4 313 aa17.16■□□□□ 0.34
PTCD3-217ENST00000488801 SFXN5Q8TD22 340 aa17.16■□□□□ 0.34
PTCD3-217ENST00000488801 HGDQ93099 445 aa17.16■□□□□ 0.34
PTCD3-217ENST00000488801 SLC35A4Q96G79 324 aa17.16■□□□□ 0.34
PTCD3-217ENST00000488801 MS4A4EQ96PG1 132 aa17.16■□□□□ 0.34
PTCD3-217ENST00000488801 SECISBP2Q96T21 854 aaKnown RBP17.16■□□□□ 0.34
PTCD3-217ENST00000488801 CXorf36Q9H7Y0 433 aa17.16■□□□□ 0.34
PTCD3-217ENST00000488801 PCNX1Q96RV3 2341 aa17.16■□□□□ 0.34
PTCD3-217ENST00000488801 MED12Q93074 2177 aa17.16■□□□□ 0.34
PTCD3-217ENST00000488801 NCOA6Q14686 2063 aaPredicted RBP17.16■□□□□ 0.34
PTCD3-217ENST00000488801 BAHCC1Q9P281 2608 aa17.16■□□□□ 0.34
PTCD3-217ENST00000488801 MYO7BQ6PIF6 2116 aa17.15■□□□□ 0.34
PTCD3-217ENST00000488801 PINLYPA6NC86 204 aa17.15■□□□□ 0.34
PTCD3-217ENST00000488801 TTC36A6NLP5 189 aa17.15■□□□□ 0.34
PTCD3-217ENST00000488801 TCP11X1B4DZS4 312 aa17.15■□□□□ 0.34
PTCD3-217ENST00000488801 J3QKU1 62 aa17.15■□□□□ 0.34
PTCD3-217ENST00000488801 EMC8O43402 210 aa17.15■□□□□ 0.34
PTCD3-217ENST00000488801 C6orf47O95873 294 aa17.15■□□□□ 0.34
PTCD3-217ENST00000488801 ABCB1P08183 1280 aaPredicted RBP17.15■□□□□ 0.34
PTCD3-217ENST00000488801 MEOX1P50221 254 aa17.15■□□□□ 0.34
PTCD3-217ENST00000488801 AQP5P55064 265 aa17.15■□□□□ 0.34
PTCD3-217ENST00000488801 FBXW4P57775 412 aa17.15■□□□□ 0.34
PTCD3-217ENST00000488801 HBA1P69905 142 aa17.15■□□□□ 0.34
PTCD3-217ENST00000488801 FOXO1Q12778 655 aa17.15■□□□□ 0.34
PTCD3-217ENST00000488801 ZNF155Q12901 538 aaPredicted RBP17.15■□□□□ 0.34
PTCD3-217ENST00000488801 IGFBP7Q16270 282 aa17.15■□□□□ 0.34
PTCD3-217ENST00000488801 RNFT1Q5M7Z0 435 aa17.15■□□□□ 0.34
PTCD3-217ENST00000488801 MFSD12Q6NUT3 480 aa17.15■□□□□ 0.34
PTCD3-217ENST00000488801 PRR22Q8IZ63 422 aa17.15■□□□□ 0.34
PTCD3-217ENST00000488801 POGLUT1Q8NBL1 392 aa17.15■□□□□ 0.34
PTCD3-217ENST00000488801 OMA1Q96E52 524 aa17.15■□□□□ 0.34
PTCD3-217ENST00000488801 MARK4Q96L34 752 aa17.15■□□□□ 0.34
PTCD3-217ENST00000488801 SIKE1Q9BRV8 207 aa17.15■□□□□ 0.34
PTCD3-217ENST00000488801 AGPAT4Q9NRZ5 378 aa17.15■□□□□ 0.34
PTCD3-217ENST00000488801 SACM1LQ9NTJ5 587 aa17.15■□□□□ 0.34
PTCD3-217ENST00000488801 FAM120CQ9NX05 1096 aaKnown RBP17.15■□□□□ 0.34
PTCD3-217ENST00000488801 ZIM2Q9NZV7 527 aa17.15■□□□□ 0.34
PTCD3-217ENST00000488801 LRRK2Q5S007 2527 aa17.15■□□□□ 0.34
PTCD3-217ENST00000488801 ANKRD33BA6NCL7 494 aa17.14■□□□□ 0.33
PTCD3-217ENST00000488801 CAPN14A8MX76 684 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms