RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 EFR3AQ14156 821 aa11.87□□□□□ -0.51
PHF1-210ENST00000488767 PTGR1Q14914 329 aa11.87□□□□□ -0.51
PHF1-210ENST00000488767 LSM12Q3MHD2 195 aaKnown RBP11.87□□□□□ -0.51
PHF1-210ENST00000488767 PRAMEF20Q5VT98 475 aa11.87□□□□□ -0.51
PHF1-210ENST00000488767 MTFR2Q6P444 385 aa11.87□□□□□ -0.51
PHF1-210ENST00000488767 NUP54Q7Z3B4 507 aa11.87□□□□□ -0.51
PHF1-210ENST00000488767 PACS2Q86VP3 889 aa11.87□□□□□ -0.51
PHF1-210ENST00000488767 PRR22Q8IZ63 422 aa11.87□□□□□ -0.51
PHF1-210ENST00000488767 SLC34A3Q8N130 599 aa11.87□□□□□ -0.51
PHF1-210ENST00000488767 EID3Q8N140 333 aa11.87□□□□□ -0.51
PHF1-210ENST00000488767 OR2L13Q8N349 312 aa11.87□□□□□ -0.51
PHF1-210ENST00000488767 VPS37AQ8NEZ2 397 aa11.87□□□□□ -0.51
PHF1-210ENST00000488767 TMCO6Q96DC7 493 aa11.87□□□□□ -0.51
PHF1-210ENST00000488767 OMA1Q96E52 524 aa11.87□□□□□ -0.51
PHF1-210ENST00000488767 ZNF597Q96LX8 424 aa11.87□□□□□ -0.51
PHF1-210ENST00000488767 JSRP1Q96MG2 331 aaPredicted RBP11.87□□□□□ -0.51
PHF1-210ENST00000488767 BTBD9Q96Q07 612 aa11.87□□□□□ -0.51
PHF1-210ENST00000488767 MEAF6Q9HAF1 191 aa11.87□□□□□ -0.51
PHF1-210ENST00000488767 IL1RL2Q9HB29 575 aa11.87□□□□□ -0.51
PHF1-210ENST00000488767 FOLH1BQ9HBA9 442 aa11.87□□□□□ -0.51
PHF1-210ENST00000488767 Q9N2J8 555 aa11.87□□□□□ -0.51
PHF1-210ENST00000488767 PNPOQ9NVS9 261 aa11.87□□□□□ -0.51
PHF1-210ENST00000488767 MARCOQ9UEW3 520 aaPredicted RBP11.87□□□□□ -0.51
PHF1-210ENST00000488767 C19orf53Q9UNZ5 99 aaPredicted RBP11.87□□□□□ -0.51
PHF1-210ENST00000488767 EXO1Q9UQ84 846 aaKnown RBP11.87□□□□□ -0.51
PHF1-210ENST00000488767 DTX4Q9Y2E6 619 aa11.87□□□□□ -0.51
PHF1-210ENST00000488767 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.87□□□□□ -0.51
PHF1-210ENST00000488767 TRGV8A0A0C4DH27 118 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 A0A1W2PRB8 838 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 ANKRD33BA6NCL7 494 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 FAM166BA8MTA8 275 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 UPK1AO00322 258 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 TO15178 435 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 ZNF354AO60765 605 aaPredicted RBP11.86□□□□□ -0.51
PHF1-210ENST00000488767 SLC19A2O60779 497 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 REM1O75628 298 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 G6PDP11413 515 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 PIGAP37287 484 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 CLNS1AP54105 237 aaKnown RBP11.86□□□□□ -0.51
PHF1-210ENST00000488767 PRKAG1P54619 331 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 C21orf58P58505 322 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 PPP2R2AP63151 447 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 OCRLQ01968 901 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 SPDYE7PQ495Y7 208 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 NXNQ6DKJ4 435 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 TMEM64Q6YI46 380 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 ZNF551Q7Z340 670 aaPredicted RBP11.86□□□□□ -0.51
PHF1-210ENST00000488767 SLC44A2Q8IWA5 706 aaPredicted RBP11.86□□□□□ -0.51
PHF1-210ENST00000488767 FAM109AQ8N4B1 249 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 SPPL2AQ8TCT8 520 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 ZNF75CPQ92670 426 aaPredicted RBP11.86□□□□□ -0.51
PHF1-210ENST00000488767 CIDECQ96AQ7 238 aaPredicted RBP11.86□□□□□ -0.51
PHF1-210ENST00000488767 VSTM2LQ96N03 204 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 COL21A1Q96P44 957 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 ZBTB18Q99592 522 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 TTTY12Q9BZ98 90 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 DPY30Q9C005 99 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 BHLHE41Q9C0J9 482 aaPredicted RBP11.86□□□□□ -0.51
PHF1-210ENST00000488767 ANKRA2Q9H9E1 313 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 NEUROD4Q9HD90 331 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 ZFP64Q9NPA5 681 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 INTS9Q9NV88 658 aaKnown RBP11.86□□□□□ -0.51
PHF1-210ENST00000488767 KLRF1Q9NZS2 232 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 SUCOQ9UBS9 1254 aaKnown RBP11.86□□□□□ -0.51
PHF1-210ENST00000488767 PCDHGB4Q9UN71 923 aa11.86□□□□□ -0.51
PHF1-210ENST00000488767 GPR55Q9Y2T6 319 aaPredicted RBP11.86□□□□□ -0.51
PHF1-210ENST00000488767 CHCHD2Q9Y6H1 151 aaPredicted RBP11.86□□□□□ -0.51
PHF1-210ENST00000488767 SHANK1Q9Y566 2161 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 LRRK2Q5S007 2527 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 OR6C70A6NIJ9 312 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 PRRG2O14669 202 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 CFLARO15519 480 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 KCNH1O95259 989 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 ABCB1P08183 1280 aaPredicted RBP11.85□□□□□ -0.51
PHF1-210ENST00000488767 STSP08842 583 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 DNASE1L1P49184 302 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 CLDN8P56748 225 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 DUSP8Q13202 625 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 SNTA1Q13424 505 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 MLC1Q15049 377 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 DECR1Q16698 335 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 DPY19L1Q2PZI1 675 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 PGS1Q32NB8 556 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 C4orf17Q53FE4 359 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 HSP90B2PQ58FF3 399 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 OGFOD2Q6N063 350 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 ARHGAP11AQ6P4F7 1023 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 BHLHB9Q6PI77 547 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 LYPD8Q6UX82 237 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 LARP4Q71RC2 724 aaKnown RBP eCLIP11.85□□□□□ -0.51
PHF1-210ENST00000488767 SPATA19Q7Z5L4 167 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 SIAH3Q8IW03 269 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 WDR75Q8IWA0 830 aaKnown RBP11.85□□□□□ -0.51
PHF1-210ENST00000488767 CDRT4Q8N9R6 151 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 NUP43Q8NFH3 380 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 OR7A2PQ8NGA2 310 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 PIWIL2Q8TC59 973 aaKnown RBP11.85□□□□□ -0.51
PHF1-210ENST00000488767 SSC4DQ8WTU2 575 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 OR5P2Q8WZ92 322 aa11.85□□□□□ -0.51
PHF1-210ENST00000488767 TMBIM1Q969X1 311 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms