RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 SNX4O95219 450 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 SNRPB2P08579 225 aaKnown RBP16.25■□□□□ 0.19
ITGB1-215ENST00000488494 NEFHP12036 1026 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 PRF1P14222 555 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 NAGAP17050 411 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 DRD5P21918 477 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 PRPH2P23942 346 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 ACVR2AP27037 513 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 MPIP34949 423 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 MC3RP41968 323 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 RPL38P63173 70 aaKnown RBP16.25■□□□□ 0.19
ITGB1-215ENST00000488494 WLSQ5T9L3 541 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 FNDC7Q5VTL7 733 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 TMEM211Q6ICI0 200 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 TMEM107Q6UX40 140 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 PACS2Q86VP3 889 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 LIX1Q8N485 282 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 AGR3Q8TD06 166 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 TMBIM1Q969X1 311 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 SARAFQ96BY9 339 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 VSTM2LQ96N03 204 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 OSBPL11Q9BXB4 747 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 PARD6BQ9BYG5 372 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 FOLH1BQ9HBA9 442 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 GALNT9Q9HCQ5 603 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 EXO1Q9UQ84 846 aaKnown RBP16.25■□□□□ 0.19
ITGB1-215ENST00000488494 GPR55Q9Y2T6 319 aaPredicted RBP16.25■□□□□ 0.19
ITGB1-215ENST00000488494 FAM215AQ9Y5M1 114 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 DNAJC15Q9Y5T4 150 aa16.25■□□□□ 0.19
ITGB1-215ENST00000488494 PCNX1Q96RV3 2341 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 ABCA12Q86UK0 2595 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 PRAMEF25A6NGN4 478 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 MYO1GB0I1T2 1018 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 TO15178 435 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 NPHS1O60500 1241 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 PLOD3O60568 738 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 UGT2B11O75310 529 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 ERN1O75460 977 aaKnown RBP16.24■□□□□ 0.19
ITGB1-215ENST00000488494 LINC00032P0C843 101 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 COX6B1P14854 86 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 CREB1P16220 341 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 TACR1P25103 407 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 NUP107P57740 925 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 ZNF844Q08AG5 666 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 KIAA0040Q15053 153 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 KRT71Q3SY84 523 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 ARL13AQ5H913 290 aaPredicted RBP16.24■□□□□ 0.19
ITGB1-215ENST00000488494 ANGPTL8Q6UXH0 198 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 NPSR1Q6W5P4 371 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 DDIASQ8IXT1 998 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 NEIL3Q8TAT5 605 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 TWIST2Q8WVJ9 160 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 RND1Q92730 232 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 TMEM41AQ96HV5 264 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 METTL2AQ96IZ6 378 aaKnown RBP16.24■□□□□ 0.19
ITGB1-215ENST00000488494 EGLN2Q96KS0 407 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 GNRHR2Q96P88 292 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 NODALQ96S42 347 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 CCT7Q99832 543 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 UBQLN3Q9H347 655 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 ACKR4Q9NPB9 350 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 KLRF1Q9NZS2 232 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 RNF6Q9Y252 685 aa16.24■□□□□ 0.19
ITGB1-215ENST00000488494 WBP11Q9Y2W2 641 aaKnown RBP16.24■□□□□ 0.19
ITGB1-215ENST00000488494 C15orf38-AP3S2A0A0A6YYH1 394 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 FAM90A27PA6NNH2 459 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 ESPNB1AK53 854 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 NPIPB8E9PQR5 432 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 GNB5O14775 395 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 PIP5K1BO14986 540 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 COQ9O75208 318 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 TRAPPC6AO75865 159 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 CT45A8P0DMV1 189 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 CT45A9P0DMV2 189 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 SDC1P18827 310 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 CHRNB4P30926 498 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 CDK9P50750 372 aaKnown RBP16.23■□□□□ 0.19
ITGB1-215ENST00000488494 PMPCAQ10713 525 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 TOMM20Q15388 145 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 CT45A2Q5DJT8 189 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 SH2D4BQ5SQS7 431 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 ANKRD26P1Q6NSI1 321 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 B3GNT6Q6ZMB0 384 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 RNF165Q6ZSG1 346 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 NUP54Q7Z3B4 507 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 CCDC71Q8IV32 467 aaPredicted RBP16.23■□□□□ 0.19
ITGB1-215ENST00000488494 MCEMP1Q8IX19 187 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 CLHC1Q8NHS4 586 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 GFM2Q969S9 779 aaKnown RBP16.23■□□□□ 0.19
ITGB1-215ENST00000488494 FCRL1Q96LA6 429 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 COL21A1Q96P44 957 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 TMEM109Q9BVC6 243 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 STMN4Q9H169 189 aaPredicted RBP16.23■□□□□ 0.19
ITGB1-215ENST00000488494 GLIPR2Q9H4G4 154 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 EML4Q9HC35 981 aaKnown RBP16.23■□□□□ 0.19
ITGB1-215ENST00000488494 DDX18Q9NVP1 670 aaKnown RBP16.23■□□□□ 0.19
ITGB1-215ENST00000488494 TAS2R9Q9NYW1 312 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 TAS2R7Q9NYW3 318 aa16.23■□□□□ 0.19
ITGB1-215ENST00000488494 CACNA1CQ13936 2221 aa16.22■□□□□ 0.19
ITGB1-215ENST00000488494 OR6C70A6NIJ9 312 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms