RNA–Protein interactions for RNA: ENST00000488452.5

NELFA-215, Transcript of negative elongation factor complex member A, human

TSL 4

Gene NELFA, Length 560 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NELFA-215	ENST00000488452	VPS11	Q9H270	941 aa		13.79	□□□□□ -0.2
NELFA-215	ENST00000488452	ACBD3	Q9H3P7	528 aa		13.79	□□□□□ -0.2
NELFA-215	ENST00000488452	ELOVL6	Q9H5J4	265 aa		13.79	□□□□□ -0.2
NELFA-215	ENST00000488452	PRODH2	Q9UF12	536 aa		13.79	□□□□□ -0.2
NELFA-215	ENST00000488452	NDRG3	Q9UGV2	375 aa		13.79	□□□□□ -0.2
NELFA-215	ENST00000488452	TMCO1	Q9UM00	188 aa		13.79	□□□□□ -0.2
NELFA-215	ENST00000488452	EXPH5	Q8NEV8	1989 aa		13.79	□□□□□ -0.2
NELFA-215	ENST00000488452		A0A1W2PPR1	153 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	PRAMEF25	A6NGN4	478 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452		A8MXE2	369 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	STX16-NPEPL1	H3BU86	382 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	STX16	O14662	325 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	T	O15178	435 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	CBX7	O95931	251 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	ALDOA	P04075	364 aa	Known RBP	13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	RBP1	P09455	135 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	CHM	P24386	653 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	STAR	P49675	285 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	SERPINB8	P50452	374 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	DIO3	P55073	304 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	GFRA1	P56159	465 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	TRAF3	Q13114	568 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	TRMT12	Q53H54	448 aa	Known RBP	13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	COMMD6	Q7Z4G1	85 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	MILR1	Q7Z6M3	343 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	IFNE	Q86WN2	208 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	PLCZ1	Q86YW0	608 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	KRTAP1-3	Q8IUG1	177 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	PLD6	Q8N2A8	252 aa	Known RBP	13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	OR52R1	Q8NGF1	315 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	LRRC1	Q9BTT6	524 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	GRPEL1	Q9HAV7	217 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	ZBTB26	Q9HCK0	441 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	TAS2R10	Q9NYW0	307 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	EHD3	Q9NZN3	535 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	PCTP	Q9UKL6	214 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	SLC12A4	Q9UP95	1085 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	EIF3L	Q9Y262	564 aa	Known RBP	13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	PLLP	Q9Y342	182 aa		13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	FLNA	P21333	2647 aa	Known RBP	13.78	□□□□□ -0.2
NELFA-215	ENST00000488452	OR6C70	A6NIJ9	312 aa		13.77	□□□□□ -0.21
NELFA-215	ENST00000488452	ARHGEF9	O43307	516 aa		13.77	□□□□□ -0.21
NELFA-215	ENST00000488452	SMIM24	O75264	130 aa		13.77	□□□□□ -0.21
NELFA-215	ENST00000488452	SRD5A2	P31213	254 aa		13.77	□□□□□ -0.21
NELFA-215	ENST00000488452	EMD	P50402	254 aa		13.77	□□□□□ -0.21
NELFA-215	ENST00000488452	LHX2	P50458	406 aa		13.77	□□□□□ -0.21
NELFA-215	ENST00000488452	HMGCS1	Q01581	520 aa		13.77	□□□□□ -0.21
NELFA-215	ENST00000488452	GALNT1	Q10472	559 aa	Predicted RBP	13.77	□□□□□ -0.21
NELFA-215	ENST00000488452	GGTA1P	Q4G0N0	100 aa		13.77	□□□□□ -0.21
NELFA-215	ENST00000488452	AAGAB	Q6PD74	315 aa		13.77	□□□□□ -0.21
NELFA-215	ENST00000488452	PLXDC2	Q6UX71	529 aa		13.77	□□□□□ -0.21
NELFA-215	ENST00000488452	CLEC9A	Q6UXN8	241 aa		13.77	□□□□□ -0.21
NELFA-215	ENST00000488452	OR4F6	Q8NGB9	312 aa		13.77	□□□□□ -0.21
NELFA-215	ENST00000488452	KLHL29	Q96CT2	875 aa		13.77	□□□□□ -0.21
NELFA-215	ENST00000488452	DTNBP1	Q96EV8	351 aa		13.77	□□□□□ -0.21
NELFA-215	ENST00000488452	NSUN5	Q96P11	429 aa	Known RBP	13.77	□□□□□ -0.21
NELFA-215	ENST00000488452	COL21A1	Q96P44	957 aa		13.77	□□□□□ -0.21
NELFA-215	ENST00000488452	G6PC3	Q9BUM1	346 aa		13.77	□□□□□ -0.21
NELFA-215	ENST00000488452	NMRK1	Q9NWW6	199 aa		13.77	□□□□□ -0.21
NELFA-215	ENST00000488452	CLCF1	Q9UBD9	225 aa		13.77	□□□□□ -0.21
NELFA-215	ENST00000488452	PACSIN3	Q9UKS6	424 aa		13.77	□□□□□ -0.21
NELFA-215	ENST00000488452	GPR55	Q9Y2T6	319 aa	Predicted RBP	13.77	□□□□□ -0.21
NELFA-215	ENST00000488452	MRPS18C	Q9Y3D5	142 aa	Known RBP	13.77	□□□□□ -0.21
NELFA-215	ENST00000488452	ZNF780B	Q9Y6R6	833 aa		13.77	□□□□□ -0.21
NELFA-215	ENST00000488452	ABCA2	Q9BZC7	2435 aa		13.76	□□□□□ -0.21
NELFA-215	ENST00000488452	FRG2C	A6NGY1	282 aa		13.76	□□□□□ -0.21
NELFA-215	ENST00000488452	PLOD2	O00469	737 aa		13.76	□□□□□ -0.21
NELFA-215	ENST00000488452	ABCB7	O75027	752 aa		13.76	□□□□□ -0.21
NELFA-215	ENST00000488452	REM1	O75628	298 aa		13.76	□□□□□ -0.21
NELFA-215	ENST00000488452	BCAS2	O75934	225 aa	Predicted RBP	13.76	□□□□□ -0.21
NELFA-215	ENST00000488452	PDYN	P01213	254 aa		13.76	□□□□□ -0.21
NELFA-215	ENST00000488452	PCSK2	P16519	638 aa		13.76	□□□□□ -0.21
NELFA-215	ENST00000488452	TRA2B	P62995	288 aa	Known RBP	13.76	□□□□□ -0.21
NELFA-215	ENST00000488452	DUSP2	Q05923	314 aa		13.76	□□□□□ -0.21
NELFA-215	ENST00000488452	CXorf67	Q86X51	503 aa	Predicted RBP	13.76	□□□□□ -0.21
NELFA-215	ENST00000488452	GRAMD2A	Q8IUY3	354 aa		13.76	□□□□□ -0.21
NELFA-215	ENST00000488452	GCNT2	Q8N0V5	402 aa		13.76	□□□□□ -0.21
NELFA-215	ENST00000488452	SELENOM	Q8WWX9	145 aa		13.76	□□□□□ -0.21
NELFA-215	ENST00000488452	TMBIM1	Q969X1	311 aa		13.76	□□□□□ -0.21
NELFA-215	ENST00000488452	CNRIP1	Q96F85	164 aa	Predicted RBP	13.76	□□□□□ -0.21
NELFA-215	ENST00000488452	ZNF681	Q96N22	645 aa		13.76	□□□□□ -0.21
NELFA-215	ENST00000488452	FAIM2	Q9BWQ8	316 aa		13.76	□□□□□ -0.21
NELFA-215	ENST00000488452	ZNF395	Q9H8N7	513 aa	Predicted RBP	13.76	□□□□□ -0.21
NELFA-215	ENST00000488452	BRF2	Q9HAW0	419 aa		13.76	□□□□□ -0.21
NELFA-215	ENST00000488452	FARSB	Q9NSD9	589 aa	Known RBP	13.76	□□□□□ -0.21
NELFA-215	ENST00000488452	DLGAP4	Q9Y2H0	992 aa		13.76	□□□□□ -0.21
NELFA-215	ENST00000488452	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		13.75	□□□□□ -0.21
NELFA-215	ENST00000488452	FAM171A2	A8MVW0	826 aa		13.75	□□□□□ -0.21
NELFA-215	ENST00000488452	MSTN	O14793	375 aa		13.75	□□□□□ -0.21
NELFA-215	ENST00000488452	TNFSF13	O75888	250 aa		13.75	□□□□□ -0.21
NELFA-215	ENST00000488452	OTC	P00480	354 aa		13.75	□□□□□ -0.21
NELFA-215	ENST00000488452	ZNF708	P17019	499 aa		13.75	□□□□□ -0.21
NELFA-215	ENST00000488452	PHB	P35232	272 aa		13.75	□□□□□ -0.21
NELFA-215	ENST00000488452	ALDH9A1	P49189	494 aa		13.75	□□□□□ -0.21
NELFA-215	ENST00000488452	CLDN18	P56856	261 aa		13.75	□□□□□ -0.21
NELFA-215	ENST00000488452	MRPS35	P82673	323 aa	Known RBP	13.75	□□□□□ -0.21
NELFA-215	ENST00000488452	LTB4R	Q15722	352 aa		13.75	□□□□□ -0.21
NELFA-215	ENST00000488452	BCL2A1	Q16548	175 aa		13.75	□□□□□ -0.21
NELFA-215	ENST00000488452	FAM180B	Q6P0A1	224 aa		13.75	□□□□□ -0.21
NELFA-215	ENST00000488452	CCDC116	Q8IYX3	515 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms