RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 IL20RBQ6UXL0 311 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 GK5Q6ZS86 529 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 TEX19Q8NA77 164 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 GLB1L3Q8NCI6 653 aaPredicted RBP10.2□□□□□ -0.78
UBE4B-210ENST00000488228 NUP43Q8NFH3 380 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 PSMA8Q8TAA3 256 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 SFXN5Q8TD22 340 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 JADE3Q92613 823 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 PNPLA2Q96AD5 504 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 SPACA9Q96E40 222 aaPredicted RBP10.2□□□□□ -0.78
UBE4B-210ENST00000488228 GIMAP5Q96F15 307 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 BTBD9Q96Q07 612 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 OR52E6Q96RD3 313 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 INPP5KQ9BT40 448 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 NSRP1Q9H0G5 558 aaKnown RBP10.2□□□□□ -0.78
UBE4B-210ENST00000488228 HPF1Q9NWY4 346 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 TAS2R9Q9NYW1 312 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 LRFN1Q9P244 771 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 TRIM33Q9UPN9 1127 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 ERVK-11Q9UQG0 969 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 FREM3P0C091 2139 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 TRAV17A0A0B4J275 112 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 PRSS51A0A1B0GVH4 220 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 ASPDHA6ND91 283 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 FRG2CA6NGY1 282 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 EIF4E1BA6NMX2 242 aaKnown RBP10.19□□□□□ -0.78
UBE4B-210ENST00000488228 G3V3Y1 287 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 BCAS2O75934 225 aaPredicted RBP10.19□□□□□ -0.78
UBE4B-210ENST00000488228 SORBS2O94875 1100 aaKnown RBP10.19□□□□□ -0.78
UBE4B-210ENST00000488228 C1QCP02747 245 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 GSNP06396 782 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 IFI6P09912 130 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 FBXO45P0C2W1 286 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 ACP2P11117 423 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 CAPN3P20807 821 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 ABCD3P28288 659 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 FBXW4P57775 412 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 PRR5P85299 388 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 PMP22Q01453 160 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 LASP1Q14847 261 aaKnown RBP10.19□□□□□ -0.78
UBE4B-210ENST00000488228 TLR1Q15399 786 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 MAPKAPK3Q16644 382 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 PLEKHN1Q494U1 663 aaPredicted RBP10.19□□□□□ -0.78
UBE4B-210ENST00000488228 AGKQ53H12 422 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 PIGGQ5H8A4 983 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 ZNF766Q5HY98 468 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 MFSD12Q6NUT3 480 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 SLC2A7Q6PXP3 512 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 OPN5Q6U736 354 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 MDGA2Q7Z553 956 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 SPATA21Q7Z572 469 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 FUNDC1Q8IVP5 155 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 SLC44A2Q8IWA5 706 aaPredicted RBP10.19□□□□□ -0.78
UBE4B-210ENST00000488228 TAGAPQ8N103 731 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 ZNF843Q8N446 348 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 NATD1Q8N6N6 113 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 FAM13CQ8NE31 585 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 C17orf47Q8NEP4 570 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 OR10G3Q8NGC4 313 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 OR4N2Q8NGD1 307 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 OR56A1Q8NGH5 318 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 OR5M3Q8NGP4 307 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 HAS2Q92819 552 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 C16orf58Q96GQ5 468 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 LCORQ96JN0 433 aaPredicted RBP10.19□□□□□ -0.78
UBE4B-210ENST00000488228 C5orf34Q96MH7 638 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 CCDC115Q96NT0 180 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 ELAC2Q9BQ52 826 aaKnown RBP10.19□□□□□ -0.78
UBE4B-210ENST00000488228 YIPF4Q9BSR8 244 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 SERHL2Q9H4I8 314 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 C3orf14Q9HBI5 128 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 SERHLQ9NQF3 203 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 SLC6A13Q9NSD5 602 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 CCDC167Q9P0B6 97 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 GPR55Q9Y2T6 319 aaPredicted RBP10.19□□□□□ -0.78
UBE4B-210ENST00000488228 PCDHGA10Q9Y5H3 936 aa10.19□□□□□ -0.78
UBE4B-210ENST00000488228 RP1L1Q8IWN7 2480 aaPredicted RBP10.19□□□□□ -0.78
UBE4B-210ENST00000488228 GXYLT2A0PJZ3 443 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 NME2P1O60361 137 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 HMGN2P05204 90 aaKnown RBP10.18□□□□□ -0.78
UBE4B-210ENST00000488228 IL6P05231 212 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 CCL3P10147 92 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 NME2P22392 152 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 PPICP45877 212 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 RFX3P48380 749 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 CCT3P49368 545 aaKnown RBP10.18□□□□□ -0.78
UBE4B-210ENST00000488228 CASP9P55211 416 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 NRG3P56975 720 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 KCNK10P57789 538 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 DCAF7P61962 342 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 PSG6Q00889 435 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 ZNHIT3Q15649 155 aaPredicted RBP10.18□□□□□ -0.78
UBE4B-210ENST00000488228 ZNF791Q3KP31 576 aaPredicted RBP10.18□□□□□ -0.78
UBE4B-210ENST00000488228 GTDC1Q4AE62 458 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 C6orf10Q5SRN2 563 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 DESI1Q6ICB0 168 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 BLOC1S3Q6QNY0 202 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 RTL4Q6ZR62 310 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 PRICKLE2Q7Z3G6 844 aa10.18□□□□□ -0.78
UBE4B-210ENST00000488228 GALNT10Q86SR1 603 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms