RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 KCTD14Q9BQ13 255 aaPredicted RBP10.27□□□□□ -0.77
HDLBP-242ENST00000488013 WDR77Q9BQA1 342 aaPredicted RBP10.27□□□□□ -0.77
HDLBP-242ENST00000488013 SLC39A3Q9BRY0 314 aa10.27□□□□□ -0.77
HDLBP-242ENST00000488013 TRIM15Q9C019 465 aa10.27□□□□□ -0.77
HDLBP-242ENST00000488013 PIGUQ9H490 435 aa10.27□□□□□ -0.77
HDLBP-242ENST00000488013 CCDC86Q9H6F5 360 aaKnown RBP10.27□□□□□ -0.77
HDLBP-242ENST00000488013 TRIM45Q9H8W5 580 aaPredicted RBP10.27□□□□□ -0.77
HDLBP-242ENST00000488013 CACYBPQ9HB71 228 aaKnown RBP10.27□□□□□ -0.77
HDLBP-242ENST00000488013 HHATLQ9HCP6 504 aa10.27□□□□□ -0.77
HDLBP-242ENST00000488013 A4GALTQ9NPC4 353 aa10.27□□□□□ -0.77
HDLBP-242ENST00000488013 POLE3Q9NRF9 147 aa10.27□□□□□ -0.77
HDLBP-242ENST00000488013 CMTM6Q9NX76 183 aa10.27□□□□□ -0.77
HDLBP-242ENST00000488013 P4HTMQ9NXG6 502 aa10.27□□□□□ -0.77
HDLBP-242ENST00000488013 P2RX2Q9UBL9 471 aa10.27□□□□□ -0.77
HDLBP-242ENST00000488013 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.27□□□□□ -0.77
HDLBP-242ENST00000488013 AHCTF1Q8WYP5 2266 aa10.27□□□□□ -0.77
HDLBP-242ENST00000488013 COL27A1Q8IZC6 1860 aaPredicted RBP10.26□□□□□ -0.77
HDLBP-242ENST00000488013 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 ELOVL7A1L3X0 281 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 FRG2CA6NGY1 282 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 A8MUA0 341 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 C5orf58C9J3I9 102 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 SOCS6O14544 535 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 CIB2O75838 187 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 PDE9AO76083 593 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 NKX2-2O95096 273 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 SERPINA7P05543 415 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 CT62P0C5K7 136 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 LIFP15018 202 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 HTR1EP28566 365 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 SSTR4P31391 388 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 TRHRP34981 398 aaPredicted RBP10.26□□□□□ -0.77
HDLBP-242ENST00000488013 EMDP50402 254 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 MVDP53602 400 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 CRISP3P54108 245 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 PRSS12P56730 875 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 NRG3P56975 720 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 EEF1A2Q05639 463 aaKnown RBP10.26□□□□□ -0.77
HDLBP-242ENST00000488013 ZNF155Q12901 538 aaPredicted RBP10.26□□□□□ -0.77
HDLBP-242ENST00000488013 TRAP1Q12931 704 aaKnown RBP10.26□□□□□ -0.77
HDLBP-242ENST00000488013 AIMP2Q13155 320 aaKnown RBP10.26□□□□□ -0.77
HDLBP-242ENST00000488013 CLN3Q13286 438 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 ELOAQ14241 798 aaKnown RBP10.26□□□□□ -0.77
HDLBP-242ENST00000488013 PCOLCEQ15113 449 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 BTBD16Q32M84 506 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 PIGGQ5H8A4 983 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.26□□□□□ -0.77
HDLBP-242ENST00000488013 CALHM3Q86XJ0 350 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 PROSER1Q86XN7 944 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 KBTBD2Q8IY47 623 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 DND1Q8IYX4 353 aaKnown RBP10.26□□□□□ -0.77
HDLBP-242ENST00000488013 SHISA5Q8N114 240 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 SLC5A8Q8N695 610 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 SLC15A4Q8N697 577 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 COX18Q8N8Q8 333 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 CLEC1AQ8NC01 280 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 C16orf52Q8NHV5 167 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 FBXO27Q8NI29 283 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 GPR151Q8TDV0 419 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 ADAMTS17Q8TE56 1095 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 JADE3Q92613 823 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 NCLNQ969V3 563 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 HSPBAP1Q96EW2 488 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 GIMAP5Q96F15 307 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 AURKBQ96GD4 344 aaPredicted RBP10.26□□□□□ -0.77
HDLBP-242ENST00000488013 TRNT1Q96Q11 434 aaKnown RBP10.26□□□□□ -0.77
HDLBP-242ENST00000488013 CCNL2Q96S94 520 aaPredicted RBP10.26□□□□□ -0.77
HDLBP-242ENST00000488013 G6PC3Q9BUM1 346 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 SPATA5L1Q9BVQ7 753 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 BTBD2Q9BX70 525 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 CADM1Q9BY67 442 aaKnown RBP10.26□□□□□ -0.77
HDLBP-242ENST00000488013 DEFB126Q9BYW3 111 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 FOLH1BQ9HBA9 442 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 ATP13A2Q9NQ11 1180 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 NPDC1Q9NQX5 325 aaPredicted RBP10.26□□□□□ -0.77
HDLBP-242ENST00000488013 SLC6A13Q9NSD5 602 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 SUCOQ9UBS9 1254 aaKnown RBP10.26□□□□□ -0.77
HDLBP-242ENST00000488013 CD300AQ9UGN4 299 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 TEKT2Q9UIF3 430 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 MAGEL2Q9UJ55 1249 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 ANGPT4Q9Y264 503 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 GPR55Q9Y2T6 319 aaPredicted RBP10.26□□□□□ -0.77
HDLBP-242ENST00000488013 OR10H1Q9Y4A9 318 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 DMXL1Q9Y485 3027 aa10.26□□□□□ -0.77
HDLBP-242ENST00000488013 SPTBP11277 2137 aa10.25□□□□□ -0.77
HDLBP-242ENST00000488013 MYOCOSA0A1B0GUC4 107 aa10.25□□□□□ -0.77
HDLBP-242ENST00000488013 PRORSD1PA6NEY8 169 aa10.25□□□□□ -0.77
HDLBP-242ENST00000488013 NME4O00746 187 aa10.25□□□□□ -0.77
HDLBP-242ENST00000488013 TO15178 435 aa10.25□□□□□ -0.77
HDLBP-242ENST00000488013 GSTA4O15217 222 aa10.25□□□□□ -0.77
HDLBP-242ENST00000488013 TNFRSF21O75509 655 aa10.25□□□□□ -0.77
HDLBP-242ENST00000488013 SEC24DO94855 1032 aaPredicted RBP10.25□□□□□ -0.77
HDLBP-242ENST00000488013 NR2F1P10589 423 aa10.25□□□□□ -0.77
HDLBP-242ENST00000488013 NAGAP17050 411 aa10.25□□□□□ -0.77
HDLBP-242ENST00000488013 F8A1P23610 371 aa10.25□□□□□ -0.77
HDLBP-242ENST00000488013 GABRA3P34903 492 aa10.25□□□□□ -0.77
HDLBP-242ENST00000488013 PCGF2P35227 344 aa10.25□□□□□ -0.77
HDLBP-242ENST00000488013 KRT20P35900 424 aa10.25□□□□□ -0.77
HDLBP-242ENST00000488013 MAP3K8P41279 467 aa10.25□□□□□ -0.77
HDLBP-242ENST00000488013 MAN2A2P49641 1150 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms