RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 TRAM1L1Q8N609 369 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 ZFP62Q8NB50 900 aaPredicted RBP3.93□□□□□ -1.78
CNN3-206ENST00000487539 ACVR1CQ8NER5 493 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 NTAN1Q96AB6 310 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 ZMYND19Q96E35 227 aaPredicted RBP3.93□□□□□ -1.78
CNN3-206ENST00000487539 RBM41Q96IZ5 413 aaKnown RBP3.93□□□□□ -1.78
CNN3-206ENST00000487539 C10orf90Q96M02 699 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 DACH2Q96NX9 599 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 WFIKKN1Q96NZ8 548 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 LYSMD1Q96S90 227 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 CRACR2AQ9BSW2 395 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 HGH1Q9BTY7 390 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 THAP2Q9H0W7 228 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 ZNF696Q9H7X3 374 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 PKD2L2Q9NZM6 624 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 SPRR3Q9UBC9 169 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 TRPC4Q9UBN4 977 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 ZNF282Q9UDV7 671 aaPredicted RBP3.93□□□□□ -1.78
CNN3-206ENST00000487539 TEKT2Q9UIF3 430 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 RCE1Q9Y256 329 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 RAP2CQ9Y3L5 183 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 PCDHGB1Q9Y5G3 927 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 DNAH1Q9P2D7 4330 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 A0A0J9YY10 115 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 ARHGEF33A8MVX0 844 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 GPR89AB7ZAQ6 455 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 GAPDHSO14556 408 aaPredicted RBP3.92□□□□□ -1.78
CNN3-206ENST00000487539 LMX1BO60663 402 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 CTSVO60911 334 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 METTL18O95568 372 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 IGHV4-39P01824 125 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 CYP1A2P05177 515 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 MYZAPP0CAP1 466 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 GPR89BP0CG08 455 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 IGHV4-31P0DP07 118 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 FCGR2AP12318 317 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 ARSBP15848 533 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 VCLP18206 1134 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 TNFSF8P32971 234 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 CDH5P33151 784 aaPredicted RBP3.92□□□□□ -1.78
CNN3-206ENST00000487539 RFC1P35251 1148 aaPredicted RBP3.92□□□□□ -1.78
CNN3-206ENST00000487539 CYLC1P35663 651 aaPredicted RBP3.92□□□□□ -1.78
CNN3-206ENST00000487539 SKIV2L2P42285 1042 aaKnown RBP3.92□□□□□ -1.78
CNN3-206ENST00000487539 PRKAA2P54646 552 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 ARSFP54793 590 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 STX17P56962 302 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 TPI1P60174 286 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 NANOS2P60321 138 aaKnown RBP3.92□□□□□ -1.78
CNN3-206ENST00000487539 THOC5Q13769 683 aaKnown RBP3.92□□□□□ -1.78
CNN3-206ENST00000487539 STK38Q15208 465 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 TAZQ16635 292 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 TYSND1Q2T9J0 566 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 ANKRD20A8PQ5CZ79 823 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 TMEM268Q5VZI3 342 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 WDR59Q6PJI9 974 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 PLEKHM3Q6ZWE6 761 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 TRILQ7L0X0 811 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 CENPQQ7L2Z9 268 aaPredicted RBP3.92□□□□□ -1.78
CNN3-206ENST00000487539 RNF144BQ7Z419 303 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 CPEB2Q7Z5Q1 589 aaKnown RBP3.92□□□□□ -1.78
CNN3-206ENST00000487539 CFAP206Q8IYR0 622 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 FBXL14Q8N1E6 418 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 AMER3Q8N944 861 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 LRRC57Q8N9N7 239 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 GDAP1Q8TB36 358 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 ARRDC2Q8TBH0 407 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 C2CD4CQ8TF44 421 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 CCT6BQ92526 530 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 KTI12Q96EK9 354 aaPredicted RBP3.92□□□□□ -1.78
CNN3-206ENST00000487539 ZNF396Q96N95 335 aaPredicted RBP3.92□□□□□ -1.78
CNN3-206ENST00000487539 ZNF285Q96NJ3 590 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 PKP2Q99959 881 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 ZSCAN5AQ9BUG6 496 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 TDRD1Q9BXT4 1180 aaKnown RBP3.92□□□□□ -1.78
CNN3-206ENST00000487539 CHRNA10Q9GZZ6 450 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 MYLK2Q9H1R3 596 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 HIPK2Q9H2X6 1198 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 SLCO5A1Q9H2Y9 848 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 TFB2MQ9H5Q4 396 aaKnown RBP3.92□□□□□ -1.78
CNN3-206ENST00000487539 ZDHHC11Q9H8X9 412 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 CHODLQ9H9P2 273 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 PLEKHA2Q9HB19 425 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 TMEM160Q9NX00 188 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 KLHL28Q9NXS3 571 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 KIF17Q9P2E2 1029 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 B4GALT7Q9UBV7 327 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 ARMCX3Q9UH62 379 aaPredicted RBP3.92□□□□□ -1.78
CNN3-206ENST00000487539 CIDEBQ9UHD4 219 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 ACAD8Q9UKU7 415 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 EIF3LQ9Y262 564 aaKnown RBP3.92□□□□□ -1.78
CNN3-206ENST00000487539 MORC2Q9Y6X9 1032 aaPredicted RBP3.92□□□□□ -1.78
CNN3-206ENST00000487539 DOCK7Q96N67 2140 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 SCN3AQ9NY46 2000 aa3.92□□□□□ -1.78
CNN3-206ENST00000487539 A0A1B0GVC2 190 aa3.91□□□□□ -1.78
CNN3-206ENST00000487539 ATP6AP2A0A1C7CYW4 349 aa3.91□□□□□ -1.78
CNN3-206ENST00000487539 FEZF1A0PJY2 475 aa3.91□□□□□ -1.78
CNN3-206ENST00000487539 TMEM89A2RUT3 159 aa3.91□□□□□ -1.78
CNN3-206ENST00000487539 RGSL1A5PLK6 1076 aa3.91□□□□□ -1.78
CNN3-206ENST00000487539 MGAT4DA6NG13 374 aa3.91□□□□□ -1.78
CNN3-206ENST00000487539 C2orf81A6NN90 581 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms