RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 SERPINB2P05120 415 aa4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 APRTP07741 180 aa4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 ZCCHC18P0CG32 403 aa4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 GHRP10912 638 aa4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 MBL2P11226 248 aaPredicted RBP4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 UGT1A4P22310 534 aa4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 CAMLGP49069 296 aa4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 IRX1P78414 480 aaPredicted RBP4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 NFATC2Q13469 925 aa4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 TEX35Q5T0J7 233 aa4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 ZC2HC1BQ5TFG8 222 aa4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 C1orf189Q5VU69 101 aa4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 RBM43Q6ZSC3 357 aaKnown RBP4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 TMEM26Q6ZUK4 368 aa4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 YRDCQ86U90 279 aaKnown RBP4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 CNPY4Q8N129 248 aa4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 LRRC17Q8N6Y2 441 aa4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 GVQW1Q8N7I0 195 aa4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 SPPL2AQ8TCT8 520 aa4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 GTF3AQ92664 365 aaKnown RBP4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 C11orf52Q96A22 123 aa4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 TMEM45BQ96B21 275 aa4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 LINC00479Q96M42 142 aa4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 CBWD1Q9BRT8 395 aa4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 DCTN5Q9BTE1 182 aa4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 FTHL17Q9BXU8 183 aa4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 ACTR3BQ9P1U1 418 aa4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 ISY1Q9ULR0 285 aaKnown RBP4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 PLA2G4CQ9UP65 541 aa4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 NIP7Q9Y221 180 aaKnown RBP eCLIP4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 ENTPD4Q9Y227 616 aa4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 PLEKHA6Q9Y2H5 1048 aa4.12□□□□□ -1.75
PRPF38A-203ENST00000487160 COL4A5P29400 1685 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 TRBV5-4A0A0C4DH59 114 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 LOC390937A0A1W2PQ73 354 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 ZNF724A8MTY0 619 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 FBP2O00757 339 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 SH2D1BO14796 132 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 SSX5O60225 188 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 SNAP91O60641 907 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 PDGFBP01127 241 aaPredicted RBP4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 ADORA3P0DMS8 318 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 EPHX2P34913 555 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 ZNF131P52739 623 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 SLC26A5P58743 744 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 RPS4XP62701 263 aaKnown RBP4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 CDKL1Q00532 357 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 FKBP3Q00688 224 aaKnown RBP4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 BTG3Q14201 252 aaPredicted RBP4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 ZNF146Q15072 292 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 CEBPEQ15744 281 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 CLPPQ16740 277 aaPredicted RBP4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 ECSCRQ19T08 205 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 SLC22A16Q86VW1 577 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 LINC00518Q8N0U6 118 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 Q8NBF4 154 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 ANKRD20A12PQ8NF67 263 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 PCNPQ8WW12 178 aaKnown RBP4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 PHYHIPQ92561 330 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 NR4A3Q92570 626 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 TBC1D31Q96DN5 1066 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 DEFB118Q96PH6 123 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 ATG10Q9H0Y0 220 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 SOHLH2Q9NX45 425 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 ATG4BQ9Y4P1 393 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 PAPPA2Q9BXP8 1791 aa4.11□□□□□ -1.75
PRPF38A-203ENST00000487160 IGHV4-30-2A0A087WSY4 118 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 ARHGEF33A8MVX0 844 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 MEI4A8MW99 385 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 SOCS3O14543 225 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 ADAM12O43184 909 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 TXNL1O43396 289 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 GMFBP60983 142 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 HYAL1Q12794 435 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 KLF5Q13887 457 aaPredicted RBP4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 LY6DQ14210 128 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 MS4A18Q3C1V0 323 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 DDI2Q5TDH0 399 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 LIPKQ5VXJ0 399 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 STEAP1BQ6NZ63 245 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 BHLHA9Q7RTU4 235 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 CARM1Q86X55 608 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 CHDHQ8NE62 594 aaPredicted RBP4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 RDH11Q8TC12 318 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 SSC4DQ8WTU2 575 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 PNPLA2Q96AD5 504 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 NABP1Q96AH0 204 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 MOCOSQ96EN8 888 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 RCHY1Q96PM5 261 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 MCRIP2Q9BUT9 160 aaKnown RBP4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 RAB17Q9H0T7 212 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 NGBQ9NPG2 151 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 LHX3Q9UBR4 397 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 IL20RAQ9UHF4 553 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 KLHDC2Q9Y2U9 406 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 SLC6A5Q9Y345 797 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 MTF2Q9Y483 593 aaPredicted RBP4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 ZMYM6O95789 1325 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 MRC1P22897 1456 aa4.1□□□□□ -1.75
PRPF38A-203ENST00000487160 NUP98P52948 1817 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms