RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 AIMP2Q13155 320 aaKnown RBP15.63■□□□□ 0.09
COL7A1-210ENST00000487017 SHFQ7M4L6 423 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 ELMOD2Q8IZ81 293 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 TMEM185BQ9H7F4 350 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 HEBP1Q9NRV9 189 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 IGLON5A6NGN9 336 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 CDK4P11802 303 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 CTBP2P56545 445 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 WNT4P56705 351 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 LRIF1Q5T3J3 769 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 TMEM164Q5U3C3 297 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 KLHDC8AQ8IYD2 350 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 TTC9BQ8N6N2 239 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 CLEC4EQ9ULY5 219 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 KRBA1A5PL33 1030 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 MYADML2A6NDP7 307 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 RNGTTO60942 597 aaKnown RBP15.63■□□□□ 0.09
COL7A1-210ENST00000487017 ENDOUP21128 410 aaKnown RBP15.63■□□□□ 0.09
COL7A1-210ENST00000487017 RELAQ04206 551 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 PDSS1Q5T2R2 415 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 ANKK1Q8NFD2 765 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 OR52E2Q8NGJ4 325 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 ELP5Q8TE02 316 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 ASB15Q8WXK1 588 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 SLC5A7Q9GZV3 580 aa15.63■□□□□ 0.09
COL7A1-210ENST00000487017 CCDC86Q9H6F5 360 aaKnown RBP15.63■□□□□ 0.09
COL7A1-210ENST00000487017 HNRNPA1P09651 372 aaKnown RBP eCLIP15.62■□□□□ 0.09
COL7A1-210ENST00000487017 GRPRP30550 384 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 GGT2P36268 569 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 AAK1Q2M2I8 961 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 FIGNL1Q6PIW4 674 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 PPIL3Q9H2H8 161 aaKnown RBP15.62■□□□□ 0.09
COL7A1-210ENST00000487017 MTHFD2LQ9H903 347 aaPredicted RBP15.62■□□□□ 0.09
COL7A1-210ENST00000487017 SACM1LQ9NTJ5 587 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 SLC39A1Q9NY26 324 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 F5H0A9 414 aaPredicted RBP15.62■□□□□ 0.09
COL7A1-210ENST00000487017 ART1P52961 327 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 NDUFAF5Q5TEU4 345 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 OR7G3Q8NG95 312 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 CD300LFQ8TDQ1 290 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 CIDECQ96AQ7 238 aaPredicted RBP15.62■□□□□ 0.09
COL7A1-210ENST00000487017 TCEAL4Q96EI5 215 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 ARL6Q9H0F7 186 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 MYNNQ9NPC7 610 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 DRGXA6NNA5 263 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 B4GAT1O43505 415 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 CNMDO75829 334 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 DHCR24Q15392 516 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 SLC6A7Q99884 636 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 NTMT1Q9BV86 223 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 ACTRT3Q9BYD9 372 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 ENY2Q9NPA8 101 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 LYRM1O43325 122 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 AFF1P51825 1210 aaKnown RBP15.62■□□□□ 0.09
COL7A1-210ENST00000487017 NR0B1P51843 470 aaKnown RBP15.62■□□□□ 0.09
COL7A1-210ENST00000487017 RHEBQ15382 184 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 CHRFAM7AQ494W8 412 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 PLAG1Q6DJT9 500 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 HMBOX1Q6NT76 420 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 ZNF440Q8IYI8 595 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 PIANPQ8IYJ0 282 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 CSNK1A1LQ8N752 337 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 ZSCAN4Q8NAM6 433 aaPredicted RBP15.62■□□□□ 0.09
COL7A1-210ENST00000487017 BORCS8Q96FH0 119 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 IL21RQ9HBE5 538 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 TMEM184CQ9NVA4 438 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 TRAPPC13A5PLN9 417 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 NPIPB15A6NHN6 443 aaPredicted RBP15.62■□□□□ 0.09
COL7A1-210ENST00000487017 NNATQ16517 81 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 SYT14Q8NB59 555 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 CHST14Q8NCH0 376 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 PROKR1Q8TCW9 393 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 PELOQ9BRX2 385 aaKnown RBP15.62■□□□□ 0.09
COL7A1-210ENST00000487017 C20orf27Q9GZN8 174 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 MRPL15Q9P015 296 aaKnown RBP15.62■□□□□ 0.09
COL7A1-210ENST00000487017 DKKL1Q9UK85 242 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 PCDHGA8Q9Y5G5 932 aa15.62■□□□□ 0.09
COL7A1-210ENST00000487017 A0A1W2PQU0 124 aa15.61■□□□□ 0.09
COL7A1-210ENST00000487017 AGAP5A6NIR3 686 aa15.61■□□□□ 0.09
COL7A1-210ENST00000487017 OR5K4A6NMS3 321 aa15.61■□□□□ 0.09
COL7A1-210ENST00000487017 RNH1P13489 461 aaKnown RBP15.61■□□□□ 0.09
COL7A1-210ENST00000487017 TUBG1P23258 451 aa15.61■□□□□ 0.09
COL7A1-210ENST00000487017 SLC22A10Q63ZE4 541 aa15.61■□□□□ 0.09
COL7A1-210ENST00000487017 SYT4Q9H2B2 425 aa15.61■□□□□ 0.09
COL7A1-210ENST00000487017 KLF8O95600 359 aaPredicted RBP15.61■□□□□ 0.09
COL7A1-210ENST00000487017 KLK3P07288 261 aaPredicted RBP15.61■□□□□ 0.09
COL7A1-210ENST00000487017 ADORA3P0DMS8 318 aa15.61■□□□□ 0.09
COL7A1-210ENST00000487017 CDKN2CP42773 168 aa15.61■□□□□ 0.09
COL7A1-210ENST00000487017 FGL1Q08830 312 aa15.61■□□□□ 0.09
COL7A1-210ENST00000487017 CDNFQ49AH0 187 aa15.61■□□□□ 0.09
COL7A1-210ENST00000487017 GPAT4Q86UL3 456 aa15.61■□□□□ 0.09
COL7A1-210ENST00000487017 ACPTQ9BZG2 426 aa15.61■□□□□ 0.09
COL7A1-210ENST00000487017 ARNT2Q9HBZ2 717 aa15.61■□□□□ 0.09
COL7A1-210ENST00000487017 EMC3Q9P0I2 261 aa15.61■□□□□ 0.09
COL7A1-210ENST00000487017 DNAJC25-GNG10A0A024R161 153 aa15.61■□□□□ 0.09
COL7A1-210ENST00000487017 HEXBP07686 556 aa15.61■□□□□ 0.09
COL7A1-210ENST00000487017 RAB28P51157 221 aa15.61■□□□□ 0.09
COL7A1-210ENST00000487017 CDK10Q15131 360 aa15.61■□□□□ 0.09
COL7A1-210ENST00000487017 TAZQ16635 292 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms