RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 TMEM247A6NEH6 219 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 FRG2CA6NGY1 282 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 UPK1AO00322 258 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 ANGPT2O15123 496 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 TO15178 435 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 ERN1O75460 977 aaKnown RBP7.65□□□□□ -1.18
SF3A1-208ENST00000485618 CPSF4O95639 269 aaKnown RBP7.65□□□□□ -1.18
SF3A1-208ENST00000485618 C6orf47O95873 294 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 CBX7O95931 251 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 AK1P00568 194 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 CRYABP02511 175 aaKnown RBP7.65□□□□□ -1.18
SF3A1-208ENST00000485618 P04436 131 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 SP1P08047 785 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 ABCB1P08183 1280 aaPredicted RBP7.65□□□□□ -1.18
SF3A1-208ENST00000485618 CELA2AP08217 269 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 ALDOCP09972 364 aaKnown RBP7.65□□□□□ -1.18
SF3A1-208ENST00000485618 GP1BBP13224 206 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 ENDOUP21128 410 aaKnown RBP7.65□□□□□ -1.18
SF3A1-208ENST00000485618 S1PR1P21453 382 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 UQCRC2P22695 453 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 PPIBP23284 216 aaKnown RBP7.65□□□□□ -1.18
SF3A1-208ENST00000485618 IL12BP29460 328 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 LCN1P31025 176 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 SOAT1P35610 550 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 MC3RP41968 323 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 EMDP50402 254 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 MRPS35P82673 323 aaKnown RBP7.65□□□□□ -1.18
SF3A1-208ENST00000485618 STX5Q13190 355 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 TUBA3CQ13748 450 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 EXOSC7Q15024 291 aaKnown RBP7.65□□□□□ -1.18
SF3A1-208ENST00000485618 EBPQ15125 230 aaKnown RBP7.65□□□□□ -1.18
SF3A1-208ENST00000485618 OR1C1Q15619 314 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 LTB4RQ15722 352 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 DECR1Q16698 335 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 AGKQ53H12 422 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 SPANXN4Q5MJ08 99 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 FAM219BQ5XKK7 198 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 SLC22A10Q63ZE4 541 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 TMEM198Q66K66 360 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 OR4F3Q6IEY1 312 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 SLC25A25Q6KCM7 469 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 RPUSD3Q6P087 351 aaKnown RBP7.65□□□□□ -1.18
SF3A1-208ENST00000485618 FAM180BQ6P0A1 224 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 TUBA3EQ6PEY2 450 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 DGAT2L6Q6ZPD8 337 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 ZNF621Q6ZSS3 439 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 NUP54Q7Z3B4 507 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 MAVSQ7Z434 540 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 MTERF4Q7Z6M4 381 aaKnown RBP7.65□□□□□ -1.18
SF3A1-208ENST00000485618 CPSF7Q8N684 471 aaKnown RBP7.65□□□□□ -1.18
SF3A1-208ENST00000485618 ANKS4BQ8N8V4 417 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 POGLUT1Q8NBL1 392 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 OR7G2Q8NG99 324 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 RFWD2Q8NHY2 731 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 GPR151Q8TDV0 419 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 ADAMTS15Q8TE58 950 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 JADE3Q92613 823 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 DOCK10Q96BY6 2186 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 TMCO6Q96DC7 493 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 THOC1Q96FV9 657 aaKnown RBP7.65□□□□□ -1.18
SF3A1-208ENST00000485618 CCDC115Q96NT0 180 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 BTBD9Q96Q07 612 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 RASL10BQ96S79 203 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 COL12A1Q99715 3063 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 ELAC2Q9BQ52 826 aaKnown RBP7.65□□□□□ -1.18
SF3A1-208ENST00000485618 EBF4Q9BQW3 602 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 G6PC3Q9BUM1 346 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 ACTRT3Q9BYD9 372 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 FAM107BQ9H098 131 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 RAD21L1Q9H4I0 556 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 TRIM45Q9H8W5 580 aaPredicted RBP7.65□□□□□ -1.18
SF3A1-208ENST00000485618 SDHAF3Q9NRP4 125 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 EXD2Q9NVH0 621 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 GIN1Q9NXP7 522 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 PLA2G3Q9NZ20 509 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 NTMQ9P121 344 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 CORO2BQ9UQ03 480 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 GPR55Q9Y2T6 319 aaPredicted RBP7.65□□□□□ -1.18
SF3A1-208ENST00000485618 NPFFR2Q9Y5X5 522 aa7.65□□□□□ -1.18
SF3A1-208ENST00000485618 COPG1Q9Y678 874 aaKnown RBP7.65□□□□□ -1.18
SF3A1-208ENST00000485618 ANKRD17O75179 2603 aaKnown RBP7.64□□□□□ -1.19
SF3A1-208ENST00000485618 TTLL8A6PVC2 850 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 EVPLLA8MZ36 301 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 MASP2O00187 686 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 HRKO00198 91 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 ANKRD28O15084 1053 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 REM1O75628 298 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 SLC25A12O75746 678 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 SNX4O95219 450 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 SNRPB2P08579 225 aaKnown RBP7.64□□□□□ -1.19
SF3A1-208ENST00000485618 CT62P0C5K7 136 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 HPGDP15428 266 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 ATP6V1C1P21283 382 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 GPX3P22352 226 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 GABRA3P34903 492 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 HBA1P69905 142 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 PLCXD2Q0VAA5 305 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 SNTA1Q13424 505 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 GNA13Q14344 377 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 MMEL1Q495T6 779 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms