RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 HNRNPA0Q13151 305 aaKnown RBP18.51■□□□□ 0.55
LIMS2-215ENST00000484252 MLF2Q15773 248 aaPredicted RBP18.51■□□□□ 0.55
LIMS2-215ENST00000484252 BAK1Q16611 211 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 TMEM44Q2T9K0 475 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 SFTPA1Q8IWL2 248 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 GDPD1Q8N9F7 314 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 OR6F1Q8NGZ6 308 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 UFD1Q92890 307 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 MS4A6EQ96DS6 147 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 ARHGDIGQ99819 225 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 SAP130Q9H0E3 1048 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 KLHL31Q9H511 634 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 WDR26Q9H7D7 661 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 ABCB9Q9NP78 766 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 A0A087WUU8 490 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 A0A1W2PR48 441 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 TBC1D3BA6NDS4 549 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 KDM4EB2RXH2 506 aaPredicted RBP18.51■□□□□ 0.55
LIMS2-215ENST00000484252 UBXN7O94888 489 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 MSL3P1P0C860 447 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 TRAPPC2P0DI81 140 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 TRAPPC2BP0DI82 140 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 AHRP35869 848 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 NR4A2P43354 598 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 RPS5P46782 204 aaKnown RBP18.51■□□□□ 0.55
LIMS2-215ENST00000484252 MTNR1AP48039 350 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 ABATP80404 500 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 MXD1Q05195 221 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 ASAH1Q13510 395 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 ZMAT1Q5H9K5 638 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 DDI2Q5TDH0 399 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 C22orf42Q6IC83 251 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 ABHD17CQ6PCB6 329 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 FAM131AQ6UXB0 335 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 QSOX2Q6ZRP7 698 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 RASSF6Q6ZTQ3 369 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 TIMM29Q9BSF4 260 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 YIPF4Q9BSR8 244 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 SLC22A4Q9H015 551 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 MRPS30Q9NP92 439 aaKnown RBP18.51■□□□□ 0.55
LIMS2-215ENST00000484252 PRDM7Q9NQW5 492 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 THAP10Q9P2Z0 257 aaPredicted RBP18.51■□□□□ 0.55
LIMS2-215ENST00000484252 PLEKHB1Q9UF11 243 aaPredicted RBP18.51■□□□□ 0.55
LIMS2-215ENST00000484252 LIPT1Q9Y234 373 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 GSTK1Q9Y2Q3 226 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 PDE4DIPQ5VU43 2346 aa18.51■□□□□ 0.55
LIMS2-215ENST00000484252 FAM170BA6NMN3 283 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 NOTOA8MTQ0 251 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 EMC8O43402 210 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 ERI3O43414 337 aaKnown RBP18.5■□□□□ 0.55
LIMS2-215ENST00000484252 CSNK2A2P19784 350 aaPredicted RBP18.5■□□□□ 0.55
LIMS2-215ENST00000484252 ATP5A1P25705 553 aaKnown RBP18.5■□□□□ 0.55
LIMS2-215ENST00000484252 TSFMP43897 325 aaKnown RBP18.5■□□□□ 0.55
LIMS2-215ENST00000484252 FLYWCH1Q4VC44 716 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 ZNF311Q5JNZ3 666 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 FAM78AQ5JUQ0 283 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 OLIG3Q7RTU3 272 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 ACOT4Q8N9L9 421 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 SRFBP1Q8NEF9 429 aaKnown RBP18.5■□□□□ 0.55
LIMS2-215ENST00000484252 SMG7Q92540 1137 aaKnown RBP18.5■□□□□ 0.55
LIMS2-215ENST00000484252 CNRIP1Q96F85 164 aaPredicted RBP18.5■□□□□ 0.55
LIMS2-215ENST00000484252 OTUB1Q96FW1 271 aaPredicted RBP18.5■□□□□ 0.55
LIMS2-215ENST00000484252 SNX18Q96RF0 628 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 PLA2G12AQ9BZM1 189 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 EGLN3Q9H6Z9 239 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 GIMAP4Q9NUV9 329 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 PRKAG2Q9UGJ0 569 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 CARD8Q9Y2G2 431 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 SF3B6Q9Y3B4 125 aaKnown RBP18.5■□□□□ 0.55
LIMS2-215ENST00000484252 A0A1W2PQ09 198 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 GLOD5A6NK44 160 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 A8MU76 341 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 PGRMC2O15173 223 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 SEC14L5O43304 696 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 IDH3BO43837 385 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 PRKRAO75569 313 aaKnown RBP18.5■□□□□ 0.55
LIMS2-215ENST00000484252 PCDH8O95206 1070 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 ALPPP05187 535 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 ACP5P13686 325 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 GABRA5P31644 462 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 DRD3P35462 400 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 NKX2-5P52952 324 aaPredicted RBP18.5■□□□□ 0.55
LIMS2-215ENST00000484252 ST3GAL3Q11203 375 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 HYAL2Q12891 473 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 CCDC116Q8IYX3 515 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 ANKK1Q8NFD2 765 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 OR2L5Q8NG80 312 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 OR8K5Q8NH50 307 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 NEDD4LQ96PU5 975 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 TEX12Q9BXU0 123 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 MIXL1Q9H2W2 232 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 OSGEPL1Q9H4B0 414 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 XKR8Q9H6D3 395 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 TRIM45Q9H8W5 580 aaPredicted RBP18.5■□□□□ 0.55
LIMS2-215ENST00000484252 PHPT1Q9NRX4 125 aaPredicted RBP18.5■□□□□ 0.55
LIMS2-215ENST00000484252 RWDD3Q9Y3V2 267 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 ATG4BQ9Y4P1 393 aa18.5■□□□□ 0.55
LIMS2-215ENST00000484252 A0A1W2PQL4 384 aaPredicted RBP18.49■□□□□ 0.55
LIMS2-215ENST00000484252 FABP12A6NFH5 140 aa18.49■□□□□ 0.55
LIMS2-215ENST00000484252 WASHC1A8K0Z3 465 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms