RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 SIRT3Q9NTG7 399 aaPredicted RBP14.63□□□□□ -0.07
UPF3A-208ENST00000484246 DEPPQ9NTK1 212 aa14.63□□□□□ -0.07
UPF3A-208ENST00000484246 CNOT11Q9UKZ1 510 aaKnown RBP14.63□□□□□ -0.07
UPF3A-208ENST00000484246 USH1CQ9Y6N9 552 aa14.63□□□□□ -0.07
UPF3A-208ENST00000484246 CNTRLQ7Z7A1 2325 aa14.63□□□□□ -0.07
UPF3A-208ENST00000484246 CLEC18AA5D8T8 446 aa14.62□□□□□ -0.07
UPF3A-208ENST00000484246 ERN1O75460 977 aaKnown RBP14.62□□□□□ -0.07
UPF3A-208ENST00000484246 PPM1BO75688 479 aa14.62□□□□□ -0.07
UPF3A-208ENST00000484246 ZNF24P17028 368 aa14.62□□□□□ -0.07
UPF3A-208ENST00000484246 CNR1P21554 472 aa14.62□□□□□ -0.07
UPF3A-208ENST00000484246 MST1P26927 711 aa14.62□□□□□ -0.07
UPF3A-208ENST00000484246 EPHA3P29320 983 aa14.62□□□□□ -0.07
UPF3A-208ENST00000484246 MAP3K8P41279 467 aa14.62□□□□□ -0.07
UPF3A-208ENST00000484246 CDK9P50750 372 aaKnown RBP14.62□□□□□ -0.07
UPF3A-208ENST00000484246 CLNS1AP54105 237 aaKnown RBP14.62□□□□□ -0.07
UPF3A-208ENST00000484246 MANFP55145 182 aaKnown RBP14.62□□□□□ -0.07
UPF3A-208ENST00000484246 PSG6Q00889 435 aa14.62□□□□□ -0.07
UPF3A-208ENST00000484246 HSPB3Q12988 150 aa14.62□□□□□ -0.07
UPF3A-208ENST00000484246 EXOSC6Q5RKV6 272 aaKnown RBP14.62□□□□□ -0.07
UPF3A-208ENST00000484246 SLC22A10Q63ZE4 541 aa14.62□□□□□ -0.07
UPF3A-208ENST00000484246 CLEC18BQ6UXF7 455 aa14.62□□□□□ -0.07
UPF3A-208ENST00000484246 GK5Q6ZS86 529 aa14.62□□□□□ -0.07
UPF3A-208ENST00000484246 CPSF7Q8N684 471 aaKnown RBP14.62□□□□□ -0.07
UPF3A-208ENST00000484246 CLEC18CQ8NCF0 446 aa14.62□□□□□ -0.07
UPF3A-208ENST00000484246 SPPL2AQ8TCT8 520 aa14.62□□□□□ -0.07
UPF3A-208ENST00000484246 RNF138Q8WVD3 245 aa14.62□□□□□ -0.07
UPF3A-208ENST00000484246 SLC35A4Q96G79 324 aa14.62□□□□□ -0.07
UPF3A-208ENST00000484246 MS4A4EQ96PG1 132 aa14.62□□□□□ -0.07
UPF3A-208ENST00000484246 FAM173AQ9BQD7 235 aa14.62□□□□□ -0.07
UPF3A-208ENST00000484246 DPY30Q9C005 99 aa14.62□□□□□ -0.07
UPF3A-208ENST00000484246 CLMPQ9H6B4 373 aa14.62□□□□□ -0.07
UPF3A-208ENST00000484246 WDR55Q9H6Y2 383 aaPredicted RBP14.62□□□□□ -0.07
UPF3A-208ENST00000484246 GPR45Q9Y5Y3 372 aa14.62□□□□□ -0.07
UPF3A-208ENST00000484246 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 A0A0G2JMM0 328 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 A0A1W2PPB8 328 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 A0A1W2PRB8 838 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 A0A1W2PRS3 328 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 ANKUB1A6NFN9 424 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 OR6C70A6NIJ9 312 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 KIR3DP1A8MWS1 328 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 RNASET2O00584 256 aaKnown RBP14.61□□□□□ -0.07
UPF3A-208ENST00000484246 TP53I11O14683 189 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 GLSO94925 669 aaPredicted RBP14.61□□□□□ -0.07
UPF3A-208ENST00000484246 P04436 131 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 ABCB1P08183 1280 aaPredicted RBP14.61□□□□□ -0.07
UPF3A-208ENST00000484246 KITP10721 976 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 GPC1P35052 558 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 MRPL19P49406 292 aaKnown RBP14.61□□□□□ -0.07
UPF3A-208ENST00000484246 RPP38P78345 283 aaKnown RBP14.61□□□□□ -0.07
UPF3A-208ENST00000484246 ALDH6A1Q02252 535 aaKnown RBP14.61□□□□□ -0.07
UPF3A-208ENST00000484246 SRSF11Q05519 484 aaKnown RBP14.61□□□□□ -0.07
UPF3A-208ENST00000484246 PLCXD2Q0VAA5 305 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 FOXO1Q12778 655 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 ZNF155Q12901 538 aaPredicted RBP14.61□□□□□ -0.07
UPF3A-208ENST00000484246 LSM12Q3MHD2 195 aaKnown RBP14.61□□□□□ -0.07
UPF3A-208ENST00000484246 SLC9B1Q4ZJI4 515 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 KRTCAP3Q53RY4 240 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 RNFT1Q5M7Z0 435 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 ZCCHC12Q6PEW1 402 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 EPGNQ6UW88 154 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 NUP54Q7Z3B4 507 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 ARFGAP2Q8N6H7 521 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 CEP70Q8NHQ1 597 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 HGDQ93099 445 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 OMA1Q96E52 524 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 GIMAP5Q96F15 307 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 GPR137Q96N19 417 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 DUSP26Q9BV47 211 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 PROK2Q9HC23 129 aa14.61□□□□□ -0.07
UPF3A-208ENST00000484246 SHANK1Q9Y566 2161 aa14.6□□□□□ -0.07
UPF3A-208ENST00000484246 PINLYPA6NC86 204 aa14.6□□□□□ -0.07
UPF3A-208ENST00000484246 C2orf72A6NCS6 295 aa14.6□□□□□ -0.07
UPF3A-208ENST00000484246 E9PBE3 544 aa14.6□□□□□ -0.07
UPF3A-208ENST00000484246 PYCARD-AS1I3L0S3 204 aa14.6□□□□□ -0.07
UPF3A-208ENST00000484246 EMC8O43402 210 aa14.6□□□□□ -0.07
UPF3A-208ENST00000484246 TSPAN2O60636 221 aa14.6□□□□□ -0.07
UPF3A-208ENST00000484246 SCN2BO60939 215 aa14.6□□□□□ -0.07
UPF3A-208ENST00000484246 IDO1P14902 403 aa14.6□□□□□ -0.07
UPF3A-208ENST00000484246 GNLYP22749 145 aa14.6□□□□□ -0.07
UPF3A-208ENST00000484246 KIR3DL1P43629 444 aa14.6□□□□□ -0.07
UPF3A-208ENST00000484246 UQCRFS1P47985 274 aa14.6□□□□□ -0.07
UPF3A-208ENST00000484246 WNT3P56703 355 aa14.6□□□□□ -0.07
UPF3A-208ENST00000484246 CORO7P57737 925 aa14.6□□□□□ -0.07
UPF3A-208ENST00000484246 FBXW4P57775 412 aa14.6□□□□□ -0.07
UPF3A-208ENST00000484246 GPR85P60893 370 aa14.6□□□□□ -0.07
UPF3A-208ENST00000484246 PRR5P85299 388 aa14.6□□□□□ -0.07
UPF3A-208ENST00000484246 KCNC4Q03721 635 aa14.6□□□□□ -0.07
UPF3A-208ENST00000484246 NNATQ16517 81 aa14.6□□□□□ -0.07
UPF3A-208ENST00000484246 GSTA3Q16772 222 aa14.6□□□□□ -0.07
UPF3A-208ENST00000484246 CYP27C1Q4G0S4 372 aa14.6□□□□□ -0.07
UPF3A-208ENST00000484246 PDCD4Q53EL6 469 aaKnown RBP14.6□□□□□ -0.07
UPF3A-208ENST00000484246 CDRT4Q8N9R6 151 aa14.6□□□□□ -0.07
UPF3A-208ENST00000484246 FAM13CQ8NE31 585 aa14.6□□□□□ -0.07
UPF3A-208ENST00000484246 SFXN5Q8TD22 340 aa14.6□□□□□ -0.07
UPF3A-208ENST00000484246 FAM120BQ96EK7 910 aaKnown RBP14.6□□□□□ -0.07
UPF3A-208ENST00000484246 ZDHHC11Q9H8X9 412 aa14.6□□□□□ -0.07
UPF3A-208ENST00000484246 IL1RL2Q9HB29 575 aa14.6□□□□□ -0.07
UPF3A-208ENST00000484246 C3orf14Q9HBI5 128 aa14.6□□□□□ -0.07
UPF3A-208ENST00000484246 SDR39U1Q9NRG7 319 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms