RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 ELP3Q9H9T3 547 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 ENAMQ9NRM1 1142 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 NFKBIL1Q9UBC1 381 aaPredicted RBP7.4□□□□□ -1.22
COL4A5-205ENST00000483338 PDE4DIPQ5VU43 2346 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 TMEM189-UBE2V1I3L0A0 370 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 ARIH2O95376 493 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 SEMG1P04279 462 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 RNH1P13489 461 aaKnown RBP7.4□□□□□ -1.22
COL4A5-205ENST00000483338 HOXB6P17509 224 aaKnown RBP7.4□□□□□ -1.22
COL4A5-205ENST00000483338 CNR1P21554 472 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 CDKN2CP42773 168 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 E2F1Q01094 437 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 TNFRSF9Q07011 255 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 PLA2G7Q13093 441 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 MAD2L1Q13257 205 aaPredicted RBP7.4□□□□□ -1.22
COL4A5-205ENST00000483338 BOP1Q14137 746 aaKnown RBP7.4□□□□□ -1.22
COL4A5-205ENST00000483338 MBTPS1Q14703 1052 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 TSNQ15631 228 aaKnown RBP7.4□□□□□ -1.22
COL4A5-205ENST00000483338 UGCGQ16739 394 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 C10orf91Q5T1B1 145 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 OR6B2Q6IFH4 312 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 CALHM3Q86XJ0 350 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 OR4Q3Q8NH05 313 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 SELENOMQ8WWX9 145 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 ZBTB45Q96K62 511 aaPredicted RBP7.4□□□□□ -1.22
COL4A5-205ENST00000483338 ZNF599Q96NL3 588 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 CDCA3Q99618 268 aaPredicted RBP7.4□□□□□ -1.22
COL4A5-205ENST00000483338 SEMA4BQ9NPR2 832 aaPredicted RBP7.4□□□□□ -1.22
COL4A5-205ENST00000483338 IMP3Q9NV31 184 aaKnown RBP7.4□□□□□ -1.22
COL4A5-205ENST00000483338 RLIMQ9NVW2 624 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 KLHL8Q9P2G9 620 aaPredicted RBP7.4□□□□□ -1.22
COL4A5-205ENST00000483338 DNAJB11Q9UBS4 358 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 ASB1Q9Y576 335 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 USP3Q9Y6I4 520 aa7.4□□□□□ -1.22
COL4A5-205ENST00000483338 A0A1B0GW55 424 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 FOXE1O00358 373 aaPredicted RBP7.4□□□□□ -1.23
COL4A5-205ENST00000483338 OR2T1O43869 369 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 OR10H2O60403 315 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 DUX4L2P0CJ85 424 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 DUX4L3P0CJ86 424 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 DUX4L4P0CJ87 422 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 DUX4L5P0CJ88 424 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 DUX4L6P0CJ89 424 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 DUX4L7P0CJ90 424 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 RGS19P49795 217 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 RPS25P62851 125 aaKnown RBP7.4□□□□□ -1.23
COL4A5-205ENST00000483338 FAM189BP81408 668 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 IL10RBQ08334 325 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 MLLT11Q13015 90 aaPredicted RBP7.4□□□□□ -1.23
COL4A5-205ENST00000483338 KIAA0040Q15053 153 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 BAIAP2L2Q6UXY1 529 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 ETV3LQ6ZN32 361 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 MOB3CQ70IA8 216 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 TSPAN33Q86UF1 283 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 ZSCAN1Q8NBB4 408 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 OR5J2Q8NH18 312 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 ZNF461Q8TAF7 563 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 CD99L2Q8TCZ2 262 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 VOPP1Q96AW1 172 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 TSPAN17Q96FV3 270 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 ZFP42Q96MM3 310 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 AMDHD1Q96NU7 426 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 CASD1Q96PB1 797 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 KLHL31Q9H511 634 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 NPDC1Q9NQX5 325 aaPredicted RBP7.4□□□□□ -1.23
COL4A5-205ENST00000483338 RASL12Q9NYN1 266 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 UBP1Q9NZI7 540 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 KLHL9Q9P2J3 617 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 RPS6KB2Q9UBS0 482 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 DUX4Q9UBX2 424 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 SLC2A6Q9UGQ3 507 aa7.4□□□□□ -1.23
COL4A5-205ENST00000483338 CARHSP1Q9Y2V2 147 aaKnown RBP7.4□□□□□ -1.23
COL4A5-205ENST00000483338 POLR3HQ9Y535 204 aaPredicted RBP7.4□□□□□ -1.23
COL4A5-205ENST00000483338 QSER1Q2KHR3 1735 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 A0A1B0GVC2 190 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 A6NIN4 97 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 FAM220BPB1ANY3 271 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 RRP8O43159 456 aaKnown RBP7.39□□□□□ -1.23
COL4A5-205ENST00000483338 CRCPO75575 148 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 IFNA10P01566 189 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 RPS2P15880 293 aaKnown RBP7.39□□□□□ -1.23
COL4A5-205ENST00000483338 HIST1H1BP16401 226 aaKnown RBP7.39□□□□□ -1.23
COL4A5-205ENST00000483338 DRD5P21918 477 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 CAP2P40123 477 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 ITGA1P56199 1179 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 BLOC1S1P78537 153 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 USF2Q15853 346 aaPredicted RBP7.39□□□□□ -1.23
COL4A5-205ENST00000483338 OR52W1Q6IF63 320 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 ZNF549Q6P9A3 640 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 UQCC3Q6UW78 93 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 HDDC3Q8N4P3 179 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 ZNF561Q8N587 486 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 C7orf31Q8N865 590 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 MCPH1Q8NEM0 835 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 UBA3Q8TBC4 463 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 ACOT11Q8WXI4 607 aaPredicted RBP7.39□□□□□ -1.23
COL4A5-205ENST00000483338 LRIG1Q96JA1 1093 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 TGM7Q96PF1 710 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 PKP4Q99569 1192 aa7.39□□□□□ -1.23
COL4A5-205ENST00000483338 PRO1933Q9H354 126 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms